Ref: Iyer,M.S. et al. unpublished

REBASE ref # 31417

Complete sequence: 2,152,289 bp

GenBank #: CP061492

REBASE acronym: NgoSW0223

Org_num: 45345

 

All begin IBX81_

Type I
ORF Gene Most similar Specificity Name
 
2070 ADP-glyceromanno-heptose 6-epimerase
2075 M M.Ngos1291ORF7750P (100% identity) M.NgoSW0223ORF2075P
2080 DNA damage-inducible protein D
2085 S S1.NgoWSII (100% identity) GCANNNNNNNNTGC S1.NgoSW0223ORF2075P
2090 S S2.NgoSW0274ORF2075P (100% identity) GCANNNNNNNNTGC S2.NgoSW0223ORF2075P
2095 R NgoWSIIP (99% identity) NgoSW0223ORF2075P
2100 ATP-dependent Clp protease ATP-binding subunit
 
3545 replication-associated recombination protein A
3550 R NgoMS11ORF6305P (99% identity) GAGNNNNNTAC NgoSW0223ORF3575P
3555 hydroxyacid dehydrogenase
3560 S S.NgoWSI (100% identity) GAGNNNNNTAC S.NgoSW0223ORF3575P
3565 186 aa hypothetical protein
3570 280 aa hypothetical protein
3575 M M.Ngos1291ORF9245P (100% identity) GAGNNNNNTAC M.NgoSW0223ORF3575P
3580 ABC transporter
Type II
ORF Gene Most similar Specificity Name
 
30 leucine--tRNA ligase
35 R NgoSW0274ORF40P (85% identity) NgoSW0223ORF35P
40 restriction endonuclease
 
40 restriction endonuclease
45 M M.Ngos1291ORF5755P (100% identity) M.NgoSW0223ORF45P
50 184 aa hypothetical protein
 
1540 phenylalanine--tRNA ligase subunit alpha
1545 V V.NgoWSORF391P (100% identity) V.NgoSW0223ORF1550P
??? M M.NgoWSORF391P (100% identity) M.NgoSW0223ORF1550P
1560 R NgoWSORF391P (100% identity) NgoSW0223ORF1550P
1565 phenylalanine--tRNA ligase subunit beta
 
1835 IS1595 family transposase
1840 RM NgoSW0259ORF1830P (100% identity) GACNNNNNTGA NgoSW0223ORF1840P
1845 S S.Ngos1291ORF7515P (100% identity) GACNNNNNTGA S.NgoSW0223ORF1840P
1850 140 aa hypothetical protein
 
1870 uroporphyrinogen decarboxylase
1875 H H.Ngos1291ORF7560P (100% identity) H.NgoSW0223ORF1885P
1880 R Ngos1291ORF7560P (100% identity) GCSGC NgoSW0223ORF1885P
1885 M M.Ngos1291ORF7560P (100% identity) GCSGC M.NgoSW0223ORF1885P
1890 DNA repair protein RadA
 
3435 3-isopropylmalate dehydrogenase
3440 R NgoWSORF784P (100% identity) GGNNCC NgoSW0223ORF3445P
3445 M M.NmeM395ORFKP (100% identity) GGNNCC M.NgoSW0223ORF3445P
3450 3-isopropylmalate dehydratase small subunit
 
4415 anthranilate synthase component I
4420 M M.NgoWLORF1156P (100% identity) GCCGGC M.NgoSW0223ORF4420P
4425 R Ngos1291ORF10080P (100% identity) GCCGGC NgoSW0223ORF4420P
4430 5-(carboxyamino)imidazole ribonucleotide
 
5805 replication initiation factor domain-containing
5810 V V.Ngos1291ORF65P (100% identity) V.NgoSW0223ORF5820P
5815 R Ngos1291ORF65P (100% identity) NgoSW0223ORF5820P
??? M M.Ngos1291ORF65P (100% identity) M.NgoSW0223ORF5820P
5830 type IV pilin protein
 
6005 excinuclease ABC subunit UvrA
6010 R NgoWSORF259P (99% identity) CCGCGG NgoSW0223ORF6015P
6015 M M.Ngos1291ORF260P (100% identity) CCGCGG M.NgoSW0223ORF6015P
6020 transposase
 
9055 FUSC family protein
9060 R NgoSW0032ORF9090P (100% identity) GGCC NgoSW0223ORF9065P
9065 M M.NgoSW0274ORF9100P (100% identity) GGCC M.NgoSW0223ORF9065P
9070 ribosome recycling factor
 
9610 93 aa hypothetical protein
9615 R NgoWSIIIP (100% identity) GGTGA NgoSW0223ORF9620P
9620 M M1.NgoSW0259ORF9605P (100% identity) GGTGA M1.NgoSW0223ORF9620P
9625 M M2.Ngos1291ORF4080P (100% identity) GGTGA M2.NgoSW0223ORF9620P
9630 RNA-binding transcriptional accessory protein
 
10150 GTPase ObgE
10155 M M.Ngos1291ORF4640P (100% identity) RGCGCY M.NgoSW0223ORF10155P
10160 R NgoWSORF2052P (99% identity) RGCGCY NgoSW0223ORF10155P
10165 cysteine--tRNA ligase
Type III
ORF Gene Most similar Specificity Name
 
2785 peptidyl-prolyl cis-trans isomerase
2790 M M.NgoSW0259ORF2770P (98% identity) CCACC M.NgoSW0223ORF2790P
2795 R NgoWSORF647P (99% identity) CCACC NgoSW0223ORF2790P
2800 tRNA 2-thiocytidine(32) synthetase TtcA
 
3250 alpha-hydroxy-acid oxidizing protein
3255 R NgoSW0011ORF3260P (100% identity) GCAGA NgoSW0223ORF3260P
3260 M M.NgoSW0011ORF3260P (100% identity) GCAGA M.NgoSW0223ORF3260P
3265 tRNA pseudouridine(55) synthase TruB