Neisseria gonorrhoeae SW0015 |
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Putative Neisseria gonorrhoeae SW0015 RM systems
Ref: Iyer,M.S. et al. unpublished
REBASE ref # 31417
Complete sequence: 2,153,514 bp
GenBank #: CP061486
REBASE acronym: NgoSW0015
Org_num: 45342
All begin IBX80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2070 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2075 | M | M.Ngos1291ORF7750P (99% identity) | M.NgoSW0015ORF2075P | |
| 2080 | DNA damage-inducible protein D | |||
| 2085 | S | S1.NgoWSII (100% identity) | GCANNNNNNNNTGC | S1.NgoSW0015ORF2075P |
| 2090 | S | S2.NgoSW0274ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.NgoSW0015ORF2075P |
| 2095 | R | NgoSW0032ORF2070P (99% identity) | NgoSW0015ORF2075P | |
| 2100 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3545 | replication-associated recombination protein A | |||
| 3550 | R | Ngos1291IP (100% identity) | GAGNNNNNTAC | NgoSW0015ORF3575P |
| 3555 | hydroxyacid dehydrogenase | |||
| 3560 | S | S.NgoSW0011ORF3580P (100% identity) | GAGNNNNNTAC | S.NgoSW0015ORF3575P |
| 3565 | 186 aa hypothetical protein | |||
| 3570 | 280 aa hypothetical protein | |||
| 3575 | M | M.NgoSW0011ORF3580P (100% identity) | GAGNNNNNTAC | M.NgoSW0015ORF3575P |
| 3580 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| ??? | R | NgoSW0274ORF40P (100% identity) | GATC | NgoSW0015ORF40P |
| 45 | site-specific DNA-methyltransferase | |||
| 40 | restriction endonuclease | |||
| ??? | M | M.NgoSW0018ORF45P (100% identity) | M.NgoSW0015ORF45P | |
| 55 | 184 aa hypothetical protein | |||
| 1545 | phenylalanine--tRNA ligase subunit alpha | |||
| 1550 | V | V.NgoWSORF391P (100% identity) | V.NgoSW0015ORF1555P | |
| 1555 | M | M.NgoSW0274ORF1550P (100% identity) | M.NgoSW0015ORF1555P | |
| 1560 | 81 aa hypothetical protein | |||
| 1565 | R | NgoSW0011ORF1560P (100% identity) | NgoSW0015ORF1555P | |
| 1570 | phenylalanine--tRNA ligase subunit beta | |||
| 1840 | SAM-dependent DNA methyltransferase | |||
| 1845 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoSW0015ORF1845P |
| 1850 | 140 aa hypothetical protein | |||
| 1870 | uroporphyrinogen decarboxylase | |||
| 1875 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoSW0015ORF1885P | |
| 1880 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoSW0015ORF1885P |
| 1885 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M1.NgoSW0015ORF1885P |
| ??? | 92 aa hypothetical protein TUM15762_01470 | |||
| 3435 | 3-isopropylmalate dehydrogenase | |||
| 3440 | R | NgoSW0274ORF3455P (100% identity) | GGNNCC | NgoSW0015ORF3445P |
| 3445 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoSW0015ORF3445P |
| 3450 | 3-isopropylmalate dehydratase small subunit | |||
| 4405 | anthranilate synthase component I | |||
| 4410 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.NgoSW0015ORF4410P |
| 4415 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoSW0015ORF4410P |
| 4420 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 5835 | replication initiation factor domain-containing | |||
| 5840 | V | V.Ngos1291ORF65P (100% identity) | V.NgoSW0015ORF5850P | |
| 5845 | R | Ngos1291ORF65P (100% identity) | NgoSW0015ORF5850P | |
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.NgoSW0015ORF5850P | |
| 5860 | type IV pilin protein | |||
| 6035 | excinuclease ABC subunit UvrA | |||
| 6040 | R | NgoSW0011ORF6055P (100% identity) | CCGCGG | NgoSW0015ORF6045P |
| 6045 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoSW0015ORF6045P |
| 6050 | transposase | |||
| 9065 | FUSC family protein | |||
| 9070 | R | NgoSW0011ORF9105P (100% identity) | GGCC | NgoSW0015ORF9075P |
| 9075 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoSW0015ORF9075P |
| 9080 | ribosome recycling factor | |||
| 9620 | 93 aa hypothetical protein | |||
| 9625 | R | NgoWSIIIP (100% identity) | GGTGA | NgoSW0015ORF9630P |
| 9630 | M | M1.NgoSW0018ORF9660P (100% identity) | GGTGA | M1.NgoSW0015ORF9630P |
| 9635 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.NgoSW0015ORF9630P |
| 9640 | RNA-binding transcriptional accessory protein | |||
| 10160 | GTPase ObgE | |||
| 10165 | M | M.NgoSW0018ORF10195P (100% identity) | RGCGCY | M.NgoSW0015ORF10165P |
| 10170 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoSW0015ORF10165P |
| 10175 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2785 | peptidyl-prolyl cis-trans isomerase | |||
| 2790 | M | M.NgoSW0032ORF2780P (100% identity) | CCACC | M.NgoSW0015ORF2790P |
| 2795 | R | NgoWPIIP (100% identity) | CCACC | NgoSW0015ORF2790P |
| 2800 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3245 | alpha-hydroxy-acid oxidizing protein | |||
| 3250 | R | NgoSW0005ORF3275P (100% identity) | GCAGA | NgoSW0015ORF3255P |
| 3255 | M | M.NgoAXII (100% identity) | GCAGA | M.NgoSW0015ORF3255P |
| 3260 | tRNA pseudouridine(55) synthase TruB | |||