Ref: Iyer,M.S. et al. unpublished

REBASE ref # 31417

Complete sequence: 2,153,173 bp

GenBank #: CP061488

REBASE acronym: NgoSW0011

Org_num: 45341

 

All begin IBX78_

Type I
ORF Gene Most similar Specificity Name
 
2075 ADP-glyceromanno-heptose 6-epimerase
2080 M M.Ngos1291ORF7750P (100% identity) M.NgoSW0011ORF2080P
2085 DNA damage-inducible protein D
2090 S S1.NgoWSII (100% identity) GCANNNNNNNNTGC S1.NgoSW0011ORF2080P
2095 S S2.NgoSW0274ORF2075P (100% identity) GCANNNNNNNNTGC S2.NgoSW0011ORF2080P
2100 R NgoSW0002ORF2090P (99% identity) NgoSW0011ORF2080P
2105 ATP-dependent Clp protease ATP-binding subunit
 
3550 replication-associated recombination protein A
3555 R Ngos1291IP (100% identity) GAGNNNNNTAC NgoSW0011ORF3580P
3560 hydroxyacid dehydrogenase
3565 S S.NgoSW0015ORF3575P (100% identity) GAGNNNNNTAC S.NgoSW0011ORF3580P
3570 186 aa hypothetical protein
3575 280 aa hypothetical protein
3580 M M.NgoSW0015ORF3575P (100% identity) GAGNNNNNTAC M.NgoSW0011ORF3580P
3585 ABC transporter
Type II
ORF Gene Most similar Specificity Name
 
30 leucine--tRNA ligase
35 R NgoSW0274ORF40P (85% identity) NgoSW0011ORF40P
40 restriction endonuclease
 
40 restriction endonuclease
??? M M.NgoSW0018ORF45P (100% identity) M.NgoSW0011ORF45P
55 184 aa hypothetical protein
 
1550 phenylalanine--tRNA ligase subunit alpha
1555 V V.NgoWSORF391P (100% identity) V.NgoSW0011ORF1560P
??? M M.NgoWSORF391P (100% identity) M.NgoSW0011ORF1560P
1570 R NgoSW0015ORF1555P (100% identity) NgoSW0011ORF1560P
1575 phenylalanine--tRNA ligase subunit beta
 
1840 IS1595 family transposase
1845 RM Ngos1291ORF7515P (100% identity) GACNNNNNTGA NgoSW0011ORF1845P
1850 S S.NgoWSORF450P (100% identity) GACNNNNNTGA S.NgoSW0011ORF1845P
1855 140 aa hypothetical protein
 
1875 uroporphyrinogen decarboxylase
1880 H H.Ngos1291ORF7560P (100% identity) H.NgoSW0011ORF1890P
1885 R Ngos1291ORF7560P (100% identity) GCSGC NgoSW0011ORF1890P
1890 M M.Ngos1291ORF7560P (100% identity) GCSGC M.NgoSW0011ORF1890P
??? 92 aa hypothetical protein TUM15762_01470
 
3440 3-isopropylmalate dehydrogenase
3445 R NgoSW0274ORF3455P (100% identity) GGNNCC NgoSW0011ORF3450P
3450 M M.NmeMBW2ORFJP (100% identity) GGNNCC M.NgoSW0011ORF3450P
3455 3-isopropylmalate dehydratase small subunit
 
4410 anthranilate synthase component I
4415 M M.NgoWLORF1156P (100% identity) GCCGGC M.NgoSW0011ORF4415P
4420 R Ngos1291ORF10080P (100% identity) GCCGGC NgoSW0011ORF4415P
4425 5-(carboxyamino)imidazole ribonucleotide
 
5845 replication initiation factor domain-containing
5850 V V.Ngos1291ORF65P (100% identity) V.NgoSW0011ORF5860P
5855 R NgoWSORF1801P (98% identity) NgoSW0011ORF5860P
??? M M.Ngos1291ORF65P (100% identity) M.NgoSW0011ORF5860P
5870 type IV pilin protein
 
6045 excinuclease ABC subunit UvrA
6050 R NgoSW0015ORF6045P (100% identity) CCGCGG NgoSW0011ORF6055P
6055 M M.Ngos1291ORF260P (100% identity) CCGCGG M.NgoSW0011ORF6055P
6060 transposase
 
9095 FUSC family protein
9100 R NgoSW0015ORF9075P (100% identity) GGCC NgoSW0011ORF9105P
9105 M M.Ngos1291ORF3515P (100% identity) GGCC M.NgoSW0011ORF9105P
9110 ribosome recycling factor
 
9650 93 aa hypothetical protein
9655 R NgoWSIIIP (100% identity) GGTGA NgoSW0011ORF9660P
9660 M M1.NgoSW0018ORF9660P (100% identity) GGTGA M1.NgoSW0011ORF9660P
9665 M M1.NgoWSIII (100% identity) GGTGA M2.NgoSW0011ORF9660P
9670 RNA-binding transcriptional accessory protein
 
10190 GTPase ObgE
10195 M M.NgoWFORF2310P (100% identity) RGCGCY M.NgoSW0011ORF10195P
10200 R Ngos1291ORF4640P (100% identity) RGCGCY NgoSW0011ORF10195P
10205 cysteine--tRNA ligase
Type III
ORF Gene Most similar Specificity Name
 
2785 peptidyl-prolyl cis-trans isomerase
2790 M M.NgoSW0032ORF2780P (100% identity) CCACC M.NgoSW0011ORF2790P
2795 R NgoWPIIP (99% identity) CCACC NgoSW0011ORF2790P
2800 tRNA 2-thiocytidine(32) synthetase TtcA
 
3250 alpha-hydroxy-acid oxidizing protein
3255 R NgoSW0223ORF3260P (100% identity) GCAGA NgoSW0011ORF3260P
3260 M M.NgoSW0223ORF3260P (100% identity) GCAGA M.NgoSW0011ORF3260P
3265 tRNA pseudouridine(55) synthase TruB
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