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Putative Neisseria gonorrhoeae SW0011 RM systems
Ref: Iyer,M.S. et al. unpublished
REBASE ref # 31417
Complete sequence: 2,153,173 bp
GenBank #: CP061488
REBASE acronym: NgoSW0011
Org_num: 45341
All begin IBX78_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2075 | ADP-glyceromanno-heptose 6-epimerase | |||
2080 | M | M.Ngos1291ORF7750P (100% identity) | M.NgoSW0011ORF2080P | |
2085 | DNA damage-inducible protein D | |||
2090 | S | S1.NgoWSII (100% identity) | GCANNNNNNNNTGC | S1.NgoSW0011ORF2080P |
2095 | S | S2.NgoSW0274ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.NgoSW0011ORF2080P |
2100 | R | NgoSW0002ORF2090P (99% identity) | NgoSW0011ORF2080P | |
2105 | ATP-dependent Clp protease ATP-binding subunit | |||
3550 | replication-associated recombination protein A | |||
3555 | R | Ngos1291IP (100% identity) | GAGNNNNNTAC | NgoSW0011ORF3580P |
3560 | hydroxyacid dehydrogenase | |||
3565 | S | S.NgoSW0015ORF3575P (100% identity) | GAGNNNNNTAC | S.NgoSW0011ORF3580P |
3570 | 186 aa hypothetical protein | |||
3575 | 280 aa hypothetical protein | |||
3580 | M | M.NgoSW0015ORF3575P (100% identity) | GAGNNNNNTAC | M.NgoSW0011ORF3580P |
3585 | ABC transporter | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
30 | leucine--tRNA ligase | |||
35 | R | NgoSW0274ORF40P (85% identity) | NgoSW0011ORF40P | |
40 | restriction endonuclease | |||
40 | restriction endonuclease | |||
??? | M | M.NgoSW0018ORF45P (100% identity) | M.NgoSW0011ORF45P | |
55 | 184 aa hypothetical protein | |||
1550 | phenylalanine--tRNA ligase subunit alpha | |||
1555 | V | V.NgoWSORF391P (100% identity) | V.NgoSW0011ORF1560P | |
??? | M | M.NgoWSORF391P (100% identity) | M.NgoSW0011ORF1560P | |
1570 | R | NgoSW0015ORF1555P (100% identity) | NgoSW0011ORF1560P | |
1575 | phenylalanine--tRNA ligase subunit beta | |||
1840 | IS1595 family transposase | |||
1845 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | NgoSW0011ORF1845P |
1850 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoSW0011ORF1845P |
1855 | 140 aa hypothetical protein | |||
1875 | uroporphyrinogen decarboxylase | |||
1880 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoSW0011ORF1890P | |
1885 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoSW0011ORF1890P |
1890 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoSW0011ORF1890P |
??? | 92 aa hypothetical protein TUM15762_01470 | |||
3440 | 3-isopropylmalate dehydrogenase | |||
3445 | R | NgoSW0274ORF3455P (100% identity) | GGNNCC | NgoSW0011ORF3450P |
3450 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoSW0011ORF3450P |
3455 | 3-isopropylmalate dehydratase small subunit | |||
4410 | anthranilate synthase component I | |||
4415 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.NgoSW0011ORF4415P |
4420 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoSW0011ORF4415P |
4425 | 5-(carboxyamino)imidazole ribonucleotide | |||
5845 | replication initiation factor domain-containing | |||
5850 | V | V.Ngos1291ORF65P (100% identity) | V.NgoSW0011ORF5860P | |
5855 | R | NgoWSORF1801P (98% identity) | NgoSW0011ORF5860P | |
??? | M | M.Ngos1291ORF65P (100% identity) | M.NgoSW0011ORF5860P | |
5870 | type IV pilin protein | |||
6045 | excinuclease ABC subunit UvrA | |||
6050 | R | NgoSW0015ORF6045P (100% identity) | CCGCGG | NgoSW0011ORF6055P |
6055 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoSW0011ORF6055P |
6060 | transposase | |||
9095 | FUSC family protein | |||
9100 | R | NgoSW0015ORF9075P (100% identity) | GGCC | NgoSW0011ORF9105P |
9105 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoSW0011ORF9105P |
9110 | ribosome recycling factor | |||
9650 | 93 aa hypothetical protein | |||
9655 | R | NgoWSIIIP (100% identity) | GGTGA | NgoSW0011ORF9660P |
9660 | M | M1.NgoSW0018ORF9660P (100% identity) | GGTGA | M1.NgoSW0011ORF9660P |
9665 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.NgoSW0011ORF9660P |
9670 | RNA-binding transcriptional accessory protein | |||
10190 | GTPase ObgE | |||
10195 | M | M.NgoWFORF2310P (100% identity) | RGCGCY | M.NgoSW0011ORF10195P |
10200 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoSW0011ORF10195P |
10205 | cysteine--tRNA ligase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2785 | peptidyl-prolyl cis-trans isomerase | |||
2790 | M | M.NgoSW0032ORF2780P (100% identity) | CCACC | M.NgoSW0011ORF2790P |
2795 | R | NgoWPIIP (99% identity) | CCACC | NgoSW0011ORF2790P |
2800 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
3250 | alpha-hydroxy-acid oxidizing protein | |||
3255 | R | NgoSW0223ORF3260P (100% identity) | GCAGA | NgoSW0011ORF3260P |
3260 | M | M.NgoSW0223ORF3260P (100% identity) | GCAGA | M.NgoSW0011ORF3260P |
3265 | tRNA pseudouridine(55) synthase TruB |