Ref: Iyer,M.S. et al. unpublished

REBASE ref # 31417

Complete sequence: 2,147,640 bp

GenBank #: CP061489

REBASE acronym: NgoSW0018

Org_num: 45343

 

All begin IBX77_

Type I
ORF Gene Most similar Specificity Name
 
2075 ADP-glyceromanno-heptose 6-epimerase
2080 M M.NgoSW0032ORF2070P (99% identity) M.NgoSW0018ORF2080P
2085 DNA damage-inducible protein D
2090 S S1.NgoWSII (100% identity) GCANNNNNNNNTGC S1.NgoSW0018ORF2080P
2095 S S2.NgoSW0274ORF2075P (100% identity) GCANNNNNNNNTGC S2.NgoSW0018ORF2080P
2100 R NgoSW0032ORF2070P (99% identity) NgoSW0018ORF2080P
2105 ATP-dependent Clp protease ATP-binding subunit
 
3525 replication-associated recombination protein A
3530 R Ngos1291IP (99% identity) GAGNNNNNTAC NgoSW0018ORF3555P
3535 hydroxyacid dehydrogenase
3540 S S.Ngos1291I (100% identity) GAGNNNNNTAC S.NgoSW0018ORF3555P
3545 186 aa hypothetical protein
3550 282 aa hypothetical protein
3555 M M.NgoSW0032ORF3575P (99% identity) GAGNNNNNTAC M.NgoSW0018ORF3555P
3560 ABC transporter
Type II
ORF Gene Most similar Specificity Name
 
30 leucine--tRNA ligase
35 R NgoSW0274ORF40P (85% identity) NgoSW0018ORF40P
40 restriction endonuclease
 
40 restriction endonuclease
??? M M.NgoSW0015ORF45P (100% identity) M.NgoSW0018ORF45P
55 184 aa hypothetical protein
 
1550 phenylalanine--tRNA ligase subunit alpha
1555 V V.NgoSW0236ORF1520P (100% identity) V.NgoSW0018ORF1560P
??? M M.NgoWSORF391P (100% identity) M.NgoSW0018ORF1560P
1570 R NgoWSORF391P (100% identity) NgoSW0018ORF1560P
1575 phenylalanine--tRNA ligase subunit beta
 
1880 uroporphyrinogen decarboxylase
1885 H H.NgoSW0002ORF1900P (100% identity) H.NgoSW0018ORF1895P
1890 R Ngos1291ORF7560P (100% identity) GCSGC NgoSW0018ORF1895P
1895 M M.NgoSW0005ORF1885P (100% identity) GCSGC M.NgoSW0018ORF1895P
1900 DNA repair protein RadA
 
3415 3-isopropylmalate dehydrogenase
3420 R NgoSW0274ORF3455P (100% identity) GGNNCC NgoSW0018ORF3425P
3425 M M.NmeM395ORFKP (100% identity) GGNNCC M.NgoSW0018ORF3425P
3430 3-isopropylmalate dehydratase small subunit
 
4395 anthranilate synthase component I
4400 M M.NgoSW0236ORF4405P (99% identity) GCCGGC M.NgoSW0018ORF4400P
4405 R Ngos1291ORF10080P (100% identity) GCCGGC NgoSW0018ORF4400P
4410 5-(carboxyamino)imidazole ribonucleotide
 
5835 replication initiation factor domain-containing
5840 V V.Ngos1291ORF65P (100% identity) V.NgoSW0018ORF5850P
5845 R NgoWSORF1801P (98% identity) NgoSW0018ORF5850P
??? M M.Ngos1291ORF65P (100% identity) M.NgoSW0018ORF5850P
5860 type IV pilin protein
 
6035 excinuclease ABC subunit UvrA
6040 R Ngos1291ORF260P (100% identity) CCGCGG NgoSW0018ORF6045P
6045 M M.Ngos1291ORF260P (100% identity) CCGCGG M.NgoSW0018ORF6045P
6050 transposase
 
9105 FUSC family protein
9110 R NgoSW0223ORF9065P (100% identity) GGCC NgoSW0018ORF9115P
9115 M M.Ngos1291ORF3515P (100% identity) GGCC M.NgoSW0018ORF9115P
9120 ribosome recycling factor
 
9650 93 aa hypothetical protein
9655 R NgoWSIIIP (100% identity) GGTGA NgoSW0018ORF9660P
9660 M M1.NgoSW0015ORF9630P (100% identity) GGTGA M1.NgoSW0018ORF9660P
9665 M M1.NgoWSIII (100% identity) GGTGA M2.NgoSW0018ORF9660P
9670 RNA-binding transcriptional accessory protein
 
10190 GTPase ObgE
10195 M M.NgoSW0015ORF10165P (100% identity) RGCGCY M.NgoSW0018ORF10195P
10200 R Ngos1291ORF4640P (100% identity) RGCGCY NgoSW0018ORF10195P
10205 cysteine--tRNA ligase
Type III
ORF Gene Most similar Specificity Name
 
2765 peptidylprolyl isomerase
2770 M M.NgoSW0032ORF2780P (99% identity) CCACC M.NgoSW0018ORF2770P
2775 R NgoSW0005ORF2795P (99% identity) CCACC NgoSW0018ORF2770P
2780 tRNA 2-thiocytidine(32) synthetase TtcA
 
3225 alpha-hydroxy-acid oxidizing protein
3230 R NgoSW0002ORF3290P (96% identity) GCAGA NgoSW0018ORF3235P
3235 M M.Ngo13479I (98% identity) GCAGA M.NgoSW0018ORF3235P
3240 tRNA pseudouridine(55) synthase TruB