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Putative Neisseria gonorrhoeae SW0018 RM systems
Ref: Iyer,M.S. et al. unpublished
REBASE ref # 31417
Complete sequence: 2,147,640 bp
GenBank #: CP061489
REBASE acronym: NgoSW0018
Org_num: 45343
All begin IBX77_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2075 | ADP-glyceromanno-heptose 6-epimerase | |||
2080 | M | M.NgoSW0032ORF2070P (99% identity) | M.NgoSW0018ORF2080P | |
2085 | DNA damage-inducible protein D | |||
2090 | S | S1.NgoWSII (100% identity) | GCANNNNNNNNTGC | S1.NgoSW0018ORF2080P |
2095 | S | S2.NgoSW0274ORF2075P (100% identity) | GCANNNNNNNNTGC | S2.NgoSW0018ORF2080P |
2100 | R | NgoSW0032ORF2070P (99% identity) | NgoSW0018ORF2080P | |
2105 | ATP-dependent Clp protease ATP-binding subunit | |||
3525 | replication-associated recombination protein A | |||
3530 | R | Ngos1291IP (99% identity) | GAGNNNNNTAC | NgoSW0018ORF3555P |
3535 | hydroxyacid dehydrogenase | |||
3540 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.NgoSW0018ORF3555P |
3545 | 186 aa hypothetical protein | |||
3550 | 282 aa hypothetical protein | |||
3555 | M | M.NgoSW0032ORF3575P (99% identity) | GAGNNNNNTAC | M.NgoSW0018ORF3555P |
3560 | ABC transporter | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
30 | leucine--tRNA ligase | |||
35 | R | NgoSW0274ORF40P (85% identity) | NgoSW0018ORF40P | |
40 | restriction endonuclease | |||
40 | restriction endonuclease | |||
??? | M | M.NgoSW0015ORF45P (100% identity) | M.NgoSW0018ORF45P | |
55 | 184 aa hypothetical protein | |||
1550 | phenylalanine--tRNA ligase subunit alpha | |||
1555 | V | V.NgoSW0236ORF1520P (100% identity) | V.NgoSW0018ORF1560P | |
??? | M | M.NgoWSORF391P (100% identity) | M.NgoSW0018ORF1560P | |
1570 | R | NgoWSORF391P (100% identity) | NgoSW0018ORF1560P | |
1575 | phenylalanine--tRNA ligase subunit beta | |||
1880 | uroporphyrinogen decarboxylase | |||
1885 | H | H.NgoSW0002ORF1900P (100% identity) | H.NgoSW0018ORF1895P | |
1890 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoSW0018ORF1895P |
1895 | M | M.NgoSW0005ORF1885P (100% identity) | GCSGC | M.NgoSW0018ORF1895P |
1900 | DNA repair protein RadA | |||
3415 | 3-isopropylmalate dehydrogenase | |||
3420 | R | NgoSW0274ORF3455P (100% identity) | GGNNCC | NgoSW0018ORF3425P |
3425 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoSW0018ORF3425P |
3430 | 3-isopropylmalate dehydratase small subunit | |||
4395 | anthranilate synthase component I | |||
4400 | M | M.NgoSW0236ORF4405P (99% identity) | GCCGGC | M.NgoSW0018ORF4400P |
4405 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoSW0018ORF4400P |
4410 | 5-(carboxyamino)imidazole ribonucleotide | |||
5835 | replication initiation factor domain-containing | |||
5840 | V | V.Ngos1291ORF65P (100% identity) | V.NgoSW0018ORF5850P | |
5845 | R | NgoWSORF1801P (98% identity) | NgoSW0018ORF5850P | |
??? | M | M.Ngos1291ORF65P (100% identity) | M.NgoSW0018ORF5850P | |
5860 | type IV pilin protein | |||
6035 | excinuclease ABC subunit UvrA | |||
6040 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoSW0018ORF6045P |
6045 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoSW0018ORF6045P |
6050 | transposase | |||
9105 | FUSC family protein | |||
9110 | R | NgoSW0223ORF9065P (100% identity) | GGCC | NgoSW0018ORF9115P |
9115 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoSW0018ORF9115P |
9120 | ribosome recycling factor | |||
9650 | 93 aa hypothetical protein | |||
9655 | R | NgoWSIIIP (100% identity) | GGTGA | NgoSW0018ORF9660P |
9660 | M | M1.NgoSW0015ORF9630P (100% identity) | GGTGA | M1.NgoSW0018ORF9660P |
9665 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.NgoSW0018ORF9660P |
9670 | RNA-binding transcriptional accessory protein | |||
10190 | GTPase ObgE | |||
10195 | M | M.NgoSW0015ORF10165P (100% identity) | RGCGCY | M.NgoSW0018ORF10195P |
10200 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoSW0018ORF10195P |
10205 | cysteine--tRNA ligase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2765 | peptidylprolyl isomerase | |||
2770 | M | M.NgoSW0032ORF2780P (99% identity) | CCACC | M.NgoSW0018ORF2770P |
2775 | R | NgoSW0005ORF2795P (99% identity) | CCACC | NgoSW0018ORF2770P |
2780 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
3225 | alpha-hydroxy-acid oxidizing protein | |||
3230 | R | NgoSW0002ORF3290P (96% identity) | GCAGA | NgoSW0018ORF3235P |
3235 | M | M.Ngo13479I (98% identity) | GCAGA | M.NgoSW0018ORF3235P |
3240 | tRNA pseudouridine(55) synthase TruB |