Lysobacter species CW239 |
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Putative Lysobacter species CW239 RM systems
Ref: Qian,Y. et al. unpublished
REBASE ref # 31357
Complete sequence: 3,043,165 bp
GenBank #: CP061847
REBASE acronym: LspCW239
Org_num: 45062
All begin H2514_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3555 | 104 aa hypothetical protein | |||
| 3560 | M | M.LspR20ORF4100P (92% identity) | M.LspCW239ORF3560P | |
| 3565 | S | LspCW239ORF3565P (42% identity) | S.LspCW239ORF3560P | |
| 3570 | Fic family protein | |||
| 3575 | 138 aa hypothetical protein | |||
| 3580 | 214 aa hypothetical protein | |||
| 3585 | R | LspR20ORF4100P (90% identity) | LspCW239ORF3560P | |
| 3590 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3550 | 156 aa hypothetical protein | |||
| ??? | RM | S.LspCW239ORF3560P (42% identity) | LspCW239ORF3565P | |
| 3570 | Fic family protein | |||
| 4595 | ribonuclease R | |||
| 4600 | RM | LspM41ORF8695P (73% identity) | LspCW239ORF4600P | |
| 4605 | abortive infection family protein | |||
| 5455 | 70 aa hypothetical protein | |||
| ??? | M | M.Fli76ORF4570P (45% identity) | M.LspCW239ORF5460P | |
| 5465 | R | Cpi172ORF7130P (34% identity) | LspCW239ORF5460P | |
| 5470 | EcoRII | |||
| 5465 | ATP-binding protein | |||
| 5470 | R | Lsp171ORF13540P (67% identity) | LspCW239ORF5480P | |
| 5475 | V | V.Lsp1750ORF9125P (70% identity) | V.LspCW239ORF5480P | |
| 5480 | M | M.LspR20ORF5630P (80% identity) | M.LspCW239ORF5480P | |
| 5485 | 154 aa hypothetical protein | |||
| 6295 | OmpA family protein | |||
| 6300 | RM | LspM41ORF3370P (75% identity) | LspCW239ORF6300P | |
| 6305 | YnfA family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 915 | HTH-type transcriptional repressor FabR | |||
| 920 | R | Pco19001ORF22915P (60% identity) | LspCW239ORF925P | |
| 925 | M | M.IceTR32ORF14185P (69% identity) | M.LspCW239ORF925P | |
| 930 | transcriptional regulator | |||
| 5030 | 234 aa hypothetical protein | |||
| 5035 | M | M.Bgl389ORF13915P (76% identity) | M.LspCW239ORF5035P | |
| 5040 | R | Bgl389ORF13915P (76% identity) | LspCW239ORF5035P | |
| 5045 | DUF262 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5040 | DEAD/DEAH box helicase family protein | |||
| 5045 | R | Ssp610A2GmrSDP (87% identity) | LspCW239GmrSDP | |
| 5050 | 147 aa hypothetical protein | |||