Vibrio navarrensis 2540-90 |
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Putative Vibrio navarrensis 2540-90 RM systems
Ref: Rigney,Z. et al. unpublished
REBASE ref # 29928
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,250,151 bp | CP061845 |
| chromosome 2: | 1,327,414 bp | CP061844 |
REBASE acronym: Vna90
Org_num: 44948
All begin IF132_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 9745 | AAA family ATPase | |||
| 9750 | S | S2.Vna51183ORF6375P (96% identity) | S2.Vna90ORF9760P | |
| 9755 | S | S1.Vna51183ORF6375P (100% identity) | S1.Vna90ORF9760P | |
| 9760 | M | M.Vna51183ORF6375P (100% identity) | M.Vna90ORF9760P | |
| 9765 | R | Vna51183ORF6375P (100% identity) | Vna90ORF9760P | |
| 9770 | restriction endonuclease | |||
| 10500 | tetratricopeptide repeat protein | |||
| 10505 | R | Vna51183IIP (100% identity) | AAGNNNNNGTCY | Vna90ORF10515P |
| 10510 | S | S.Vna51183II (100% identity) | AAGNNNNNGTCY | S.Vna90ORF10515P |
| 10515 | M | M.Vna51183II (100% identity) | AAGNNNNNGTCY | M.Vna90ORF10515P |
| 10520 | GIY-YIG nuclease family protein | |||
| 14255 | M48 family metallopeptidase | |||
| 14260 | R | Vna51183IP (100% identity) | ACAYNNNNNNTARC | Vna90ORF14280P |
| 14265 | DNA binding domain-containing protein | |||
| 14270 | histidinol-phosphatase | |||
| 14275 | S | S.Vna51183I (99% identity) | ACAYNNNNNNTARC | S.Vna90ORF14280P |
| 14280 | M | M.Vna51183I (100% identity) | ACAYNNNNNNTARC | M.Vna90ORF14280P |
| 14285 | helix-turn-helix transcriptional regulator | |||
| 16295 | 191 aa hypothetical protein | |||
| 16300 | R | Vna51183IIIP (100% identity) | Vna90ORF16310P | |
| 16305 | S | S.Vna51183III (77% identity) | S.Vna90ORF16310P | |
| 16310 | M | M.Vna51183III (100% identity) | M.Vna90ORF16310P | |
| 16315 | DNA-binding transcriptional regulator Fis | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 13670 | ribulose-phosphate 3-epimerase | |||
| 13675 | M | M.Vna51183Dam (100% identity) | GATC | M.Vna90DamP |
| 13680 | AAA family ATPase | |||
| 17475 | ParB N-terminal domain-containing protein | |||
| 17480 | M | M.Vna51183ORF19175P (100% identity) | M.Vna90ORF17480P | |
| 17485 | AAA family ATPase | |||
| chromosome 2 | ||||
| 5385 | GIY-YIG nuclease family protein | |||
| 5390 | R | Vna51183ORF10050P (100% identity) | Vna90ORF5400P | |
| 5395 | 456 aa hypothetical protein | |||
| 5400 | M | M.Vna51183ORF10050P (100% identity) | M.Vna90ORF5400P | |
| 5405 | GMP reductase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 9765 | DEAD/DEAH box helicase family protein | |||
| 9770 | R | Vna51183MrrP (100% identity) | Vna90MrrP | |
| 9775 | 294 aa hypothetical protein | |||