Pseudomonas aeruginosa PA179 |
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Putative Pseudomonas aeruginosa PA179 RM systems
Ref: Alamri,A.M. and Alnimr,A.M. unpublished
REBASE ref # 31339
Complete sequence: 6,580,692 bp
GenBank #: CP058257
REBASE acronym: Pae179
Org_num: 44940
All begin HWH41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 435 | site-specific integrase | |||
| 440 | M | M.Paes32ORF100P (100% identity) | M.Pae179ORF440P | |
| 445 | S | S.Paes32ORF100P (100% identity) | S.Pae179ORF440P | |
| 450 | R | Paes32ORF100P (100% identity) | Pae179ORF440P | |
| 455 | helix-turn-helix transcriptional regulator | |||
| 1810 | M48 family metallopeptidase | |||
| 1815 | R | Ssp0042ORF670P (100% identity) | TCCANNNNNNCGT | Pae179ORF1850P |
| 1820 | VWA domain-containing protein | |||
| 1825 | AAA family ATPase | |||
| 1830 | PD-(D/E)XK nuclease family protein | |||
| 1835 | virulence RhuM family protein | |||
| 1840 | 410 aa hypothetical protein | |||
| 1845 | S | S.PmoB5ORF1050P (100% identity) | TCCANNNNNNCGT | S.Pae179ORF1850P |
| 1850 | M | M.PmoB5ORF1050P (100% identity) | TCCANNNNNNCGT | M.Pae179ORF1850P |
| 1855 | restriction endonuclease subunit S | |||
| 28895 | DUF91 domain-containing protein | |||
| 28900 | S | S.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | S.Pae179ORF28905P |
| 28905 | M | M.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | M.Pae179ORF28905P |
| 28910 | HNH endonuclease | |||
| 28915 | R | PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | Pae179ORF28905P |
| 28920 | peptidase M15 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
| 25 | RM | Paes32ORF5P (100% identity) | GATCGAG | Pae179ORF25P |
| 30 | 68 aa hypothetical protein | |||
| 20820 | recombination-associated protein RdgC | |||
| 20825 | M | M.PaeSPA01ORF32110P (100% identity) | M.Pae179ORF20825P | |
| 20830 | 76 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14675 | transposase | |||
| 14680 | R | Paes32ORF4058P (100% identity) | Pae179ORF14685P | |
| 14685 | M | M.Paes32ORF4058P (100% identity) | M.Pae179ORF14685P | |
| 14690 | AIPR family protein | |||