Klebsiella pneumoniae C39 |
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Putative Klebsiella pneumoniae C39 RM systems
Ref: Liu,Z. and Chen,R. unpublished
REBASE ref # 31284
| Sequence length: | GenBank #: | |
| Chromosome: | 5,290,020 bp | CP061700 |
| plasmid pC39-334kb: | 334,893 bp | CP061701 |
REBASE acronym: KpnC39
Org_num: 44932
All begin IE968_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22680 | M48 family metallopeptidase | |||
| 22685 | R | Kpn2P7ORF23090P (100% identity) | KpnC39ORF22690P | |
| 22690 | M | M.Kpn2P7ORF23090P (100% identity) | M.KpnC39ORF22690P | |
| 22695 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pC39-334kb | ||||
| 26340 | IS6-like element IS26 family transposase | |||
| 26345 | M | M.Ror2015ORFEP (100% identity) | GACNNNNNNGTC | M.KpnC39ORF26345P |
| 26350 | S | S.Ror2015ORFEP (100% identity) | GACNNNNNNGTC | S.KpnC39ORF26345P |
| 26355 | R | Ror2015ORFEP (100% identity) | GACNNNNNNGTC | KpnC39ORF26345P |
| 26360 | ISL3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1800 | cell division protein DamX | |||
| 1805 | M | M.KspC31DamP (100% identity) | GATC | M.KpnC39DamP |
| 1810 | ribulose-phosphate 3-epimerase | |||
| 8365 | transposase | |||
| 8370 | M | M.KpnTHKORF8605P (100% identity) | M.KpnC39ORF8370P | |
| 8375 | 925 aa hypothetical protein | |||
| 8735 | helix-turn-helix domain-containing protein | |||
| 8740 | M | M.Kpn421ORF7070P (99% identity) | M.KpnC39ORF8740P | |
| 8745 | RusA family crossover junction | |||
| 8930 | phosphohydrolase | |||
| ??? | M | M.KpnvKPORF8710P (100% identity) | CCWGG | M.KpnC39ORF8935P |
| 8940 | very short patch repair endonuclease | |||
| ??? | dcm | |||
| 8940 | V | V.Ksp2N3ORFEP (75% identity) | V.KpnC39DcmP | |
| 8945 | drug/metabolite exporter YedA | |||
| 15555 | replication endonuclease | |||
| 15560 | M | M.Kpn2P7ORF15970P (100% identity) | M.KpnC39ORF15560P | |
| 15565 | 3-5 exoribonuclease | |||
| 22445 | HNH endonuclease | |||
| 22450 | R | Ksp4251ORF21915P (100% identity) | KpnC39ORF22450P | |
| 22455 | type VI secretion system tube protein Hcp | |||
| plasmid pC39-334kb | ||||
| 26895 | 1127 aa hypothetical protein | |||
| 26900 | M | M.RorVR1ORF56450P (100% identity) | M.KpnC39ORF26900P | |
| 26905 | 81 aa hypothetical protein | |||
| 26975 | 82 aa hypothetical protein | |||
| 26980 | R | RorVR1ORF56260P (100% identity) | KpnC39ORF26985P | |
| 26985 | M | M.Kpn3088ORF27330P (100% identity) | M.KpnC39ORF26985P | |
| 26990 | 109 aa hypothetical protein | |||