Citrobacter freundii N16-03880 |
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Putative Citrobacter freundii N16-03880 RM systems
Ref: Gobeille Pare,S. et al. J. Antimicrob. Chemother. (2020) In press
REBASE ref # 31103
| Sequence length: | GenBank #: | |
| Chromosome: | 5,268,984 bp | CP047269 |
| plasmid pCf3880: | 277,055 bp | CP047270 |
REBASE acronym: Cfr3880
Org_num: 44732
All begin F3114_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 395 | serine/threonine protein kinase | |||
| 400 | M | M.Cfr4128ORF400P (100% identity) | M.Cfr3880ORF400P | |
| 405 | S | S.Cfr4128ORF400P (100% identity) | S.Cfr3880ORF400P | |
| 410 | DUF4268 domain-containing protein | |||
| 415 | R | Cfr4128ORF400P (100% identity) | Cfr3880ORF400P | |
| 420 | 479 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2105 | cell division protein DamX | |||
| 2110 | M | M.Eco5172DamP (100% identity) | GATC | M.Cfr3880DamP |
| 2115 | ribulose-phosphate 3-epimerase | |||
| 2650 | DUF2556 domain-containing protein | |||
| 2655 | M | M.Eco5172ORF4078P (100% identity) | ATGCAT | M.Cfr3880ORF2655P |
| 2660 | tyrosine-type recombinase/integrase | |||
| 9875 | phosphohydrolase | |||
| 9880 | M | M.CspSL156ORF9755P (100% identity) | CCWGG | M.Cfr3880ORF9880P |
| 9885 | V | V.CyoL6ORF9385P (100% identity) | V.Cfr3880ORF9880P | |
| 9890 | drug/metabolite exporter YedA | |||
| 10420 | GntR family transcriptional regulator | |||
| ??? | M | M.Cfr4128ORF10405P (100% identity) | M.Cfr3880ORF10425P | |
| 10430 | 72 aa hypothetical protein | |||
| 20395 | DUF1317 family protein | |||
| ??? | M | M.Cfr4128ORF20310P (100% identity) | M.Cfr3880ORF20400P | |
| 20405 | DUF4060 family protein | |||
| 22125 | HNH endonuclease | |||
| 22130 | R | CspSL156ORF21620P (100% identity) | Cfr3880ORF22130P | |
| 22135 | 280 aa hypothetical protein | |||
| plasmid pCf3880 | ||||
| 26915 | AAA family ATPase | |||
| ??? | M | M.Kpn3892ORF26955P (100% identity) | CCWGG | M.Cfr3880ORF26920P |
| 26925 | R | Kpn9645ORFAP (100% identity) | CCWGG | Cfr3880ORF26920P |
| 26930 | tyrosine-type recombinase/integrase | |||
| 26950 | DNA breaking-rejoining protein | |||
| 26955 | M | M.Kpni11ayORF5166P (100% identity) | M.Cfr3880ORF26955P | |
| 26960 | 73 aa hypothetical protein | |||