Putative Neisseria gonorrhoeae BJ16148 RM systems
Ref: Chen,S.C. et al. J. Antimicrob. Chemother. 75 (9), 2499-2502 (2020)
REBASE ref # 31293
Complete sequence: 2,215,157 bp
GenBank #: CP050505
REBASE acronym: Ngo16148
Org_num: 44749
All begin HCR02_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2055 | ADP-glyceromanno-heptose 6-epimerase | |||
2060 | M | M.NgoSH240ORFMP (100% identity) | GACNNNNNNNTGC | M.Ngo16148ORF2060P |
2065 | DNA damage-inducible protein D | |||
??? | S | S.NgoTFGB2ORFAP (100% identity) | GACNNNNNNNTGC | S.Ngo16148ORF2060P |
2080 | R | NgoSH240ORFMP (100% identity) | GACNNNNNNNTGC | Ngo16148ORF2060P |
2085 | ATP-dependent Clp protease ATP-binding subunit | |||
3525 | replication-associated recombination protein A | |||
3530 | R | NgoSH240ORFBP (99% identity) | GAGNNNNNTAC | Ngo16148ORF3555P |
3535 | hydroxyacid dehydrogenase | |||
3540 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo16148ORF3555P |
3545 | 186 aa hypothetical protein | |||
3550 | 279 aa hypothetical protein | |||
3555 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo16148ORF3555P |
3560 | ABC transporter | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
30 | leucine--tRNA ligase | |||
??? | R | NgoWGORF7P (100% identity) | GATC | Ngo16148ORF35P |
45 | site-specific DNA-methyltransferase | |||
40 | DNA adenine methylase | |||
45 | M | M.Ngos1291ORF5755P (100% identity) | M.Ngo16148ORF45P | |
50 | 184 aa hypothetical protein | |||
1525 | phenylalanine--tRNA ligase subunit alpha | |||
1530 | V | V.NgoWSORF391P (100% identity) | V.Ngo16148ORF1535P | |
??? | M | M.NgoWSORF391P (100% identity) | M.Ngo16148ORF1535P | |
1545 | R | NgoWSORF391P (100% identity) | Ngo16148ORF1535P | |
1550 | phenylalanine--tRNA ligase subunit beta | |||
1820 | IS1595 family transposase | |||
1825 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo16148ORF1825P |
1830 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo16148ORF1825P |
1835 | 140 aa hypothetical protein | |||
1855 | uroporphyrinogen decarboxylase | |||
1860 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo16148ORF1870P | |
1865 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo16148ORF1870P |
1870 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo16148ORF1870P |
1875 | DNA repair protein RadA | |||
3420 | 3-isopropylmalate dehydrogenase | |||
3425 | R | NgoSH240ORFIP (100% identity) | GGNNCC | Ngo16148ORF3430P |
3430 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo16148ORF3430P |
3435 | 3-isopropylmalate dehydratase small subunit | |||
4665 | anthranilate synthase component I | |||
4670 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo16148ORF4670P |
4675 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo16148ORF4670P |
4680 | 5-(carboxyamino)imidazole ribonucleotide | |||
6010 | replication initiation factor | |||
6015 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo16148ORF6025P | |
6020 | R | Ngos1291ORF65P (100% identity) | Ngo16148ORF6025P | |
??? | M | M.NgoSH240ORFLP (100% identity) | M.Ngo16148ORF6025P | |
6035 | 48 aa hypothetical protein | |||
6225 | excinuclease ABC subunit UvrA | |||
6230 | R | NgoCT213ORF5860P (100% identity) | CCGCGG | Ngo16148ORF6235P |
6235 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo16148ORF6235P |
6240 | transposase | |||
9440 | FUSC family protein | |||
9445 | R | NgoSH240ORFKP (100% identity) | GGCC | Ngo16148ORF9450P |
9450 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo16148ORF9450P |
9455 | ribosome recycling factor | |||
9990 | 93 aa hypothetical protein | |||
9995 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo16148ORF10000P |
10000 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.Ngo16148ORF10000P |
10005 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo16148ORF10000P |
10010 | RNA-binding transcriptional accessory protein | |||
10560 | GTPase ObgE | |||
10565 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo16148ORF10565P |
10570 | R | NgoSH240ORFCP (91% identity) | RGCGCY | Ngo16148ORF10565P |
10575 | cysteine--tRNA ligase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2785 | peptidyl-prolyl cis-trans isomerase | |||
2790 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo16148ORF2790P |
2795 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo16148ORF2790P |
2800 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
3245 | alpha-hydroxy-acid oxidizing protein | |||
3250 | R | NgoSH240ORFJP (100% identity) | Ngo16148ORF3255P | |
3255 | M | M.NgoSW0259ORF3235P (100% identity) | M.Ngo16148ORF3255P | |
3260 | 182 aa hypothetical protein |