Klebsiella pneumoniae NU-CRE213 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Klebsiella pneumoniae NU-CRE213 RM systems
Ref: Ozer,E.A. et al. unpublished
REBASE ref # 31277
| Sequence length: | GenBank #: | |
| Chromosome: | 5,425,828 bp | CP061385 |
| plasmid pCRE-213-2: | 114,416 bp | CP061387 |
REBASE acronym: KpnCRE213
Org_num: 44710
All begin HCV85_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pCRE-213-2 | ||||
| 28005 | 71 aa hypothetical protein | |||
| 28010 | M | M.Sen42919ORF11180P (100% identity) | CAGNNNNNNCGT | M.KpnCRE213ORF28010P |
| 28015 | S | S.Sen42919ORF11180P (100% identity) | CAGNNNNNNCGT | S.KpnCRE213ORF28010P |
| 28020 | R | Sen42919ORF11180P (100% identity) | CAGNNNNNNCGT | KpnCRE213ORF28010P |
| 28025 | ISL3-like element ISKpn25 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1795 | cell division protein DamX | |||
| 1800 | M | M.KspC31DamP (100% identity) | GATC | M.KpnCRE213DamP |
| 1805 | ribulose-phosphate 3-epimerase | |||
| 6215 | TraR/DksA family transcriptional regulator | |||
| 6220 | M | M.Ksp1927ORF4530P (100% identity) | M.KpnCRE213ORF6220P | |
| 6225 | replication endonuclease | |||
| 6970 | 60 aa hypothetical protein | |||
| 6975 | M | M.Kpni512ORF1337P (100% identity) | M.KpnCRE213ORF6975P | |
| 6980 | DUF1317 family protein | |||
| 11265 | TraR/DksA family transcriptional regulator | |||
| 11270 | M | M.Ksp1927ORF17200P (100% identity) | GATC | M.KpnCRE213ORF11270P |
| 11275 | replication endonuclease | |||
| 13550 | tyrosine-type recombinase/integrase | |||
| 13555 | M | M.Ksp1927ORF14405P (100% identity) | M.KpnCRE213ORF13555P | |
| 13560 | regulator | |||
| 19870 | drug/metabolite exporter YedA | |||
| 19875 | V | V.KspC31DcmP (75% identity) | V.KpnCRE213DcmP | |
| ??? | M | M.Kqu6DcmP (82% identity) | CCWGG | M.KpnCRE213DcmP |
| 19885 | phosphohydrolase | |||
| 20555 | DUF1317 family protein | |||
| 20560 | M | M.Kpss50ORF20150P (100% identity) | M.KpnCRE213ORF20560P | |
| 20565 | dcm methylase | |||
| 23875 | HNH endonuclease | |||
| 23880 | R | KpnvKP9ORFAP (100% identity) | KpnCRE213ORF23880P | |
| 23885 | DUF2778 domain-containing protein | |||
| plasmid pCRE-213-2 | ||||
| 28615 | 73 aa hypothetical protein | |||
| 28620 | M | M.SmaBWH35ORF25885P (100% identity) | M.KpnCRE213ORF28620P | |
| 28625 | 76 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20005 | SpnT protein | |||
| 20010 | M | M.Kpni512ORF1793P (100% identity) | CGCATC | M.KpnCRE213ORF20010P |
| 20015 | R | Kpni512ORF1793P (100% identity) | CGCATC | KpnCRE213ORF20010P |
| 20020 | shufflon system plasmid conjugative transfer | |||