Lactobacillus kefiranofaciens 1207 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Lactobacillus kefiranofaciens 1207 RM systems
Ref: Wang,Y. et al. unpublished
REBASE ref # 31285
Complete sequence: 2,149,348 bp
GenBank #: CP061341
REBASE acronym: Lke1207
Org_num: 44737
All begin ICI50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3385 | zinc-ribbon domain-containing protein | |||
| 3390 | M | M.LkeM1ORF1695P (96% identity) | M.Lke1207ORF3390P | |
| 3395 | IS3 family transposase | |||
| 3510 | IS256 family transposase | |||
| 3515 | R | Lul93C1ORF3945P (76% identity) | Lke1207ORF3515P | |
| 3520 | restriction endonuclease | |||
| 5175 | DUF262 domain-containing protein | |||
| 5180 | R | LkeM1ORF3495P (99% identity) | Lke1207ORF5200P | |
| 5185 | S | S2.LkeM1ORF3495P (100% identity) | S2.Lke1207ORF5200P | |
| 5190 | site-specific integrase | |||
| 5195 | S | S1.LkeM1ORF3495P (100% identity) | S1.Lke1207ORF5200P | |
| 5200 | M | M.LacN20ORF6265P (90% identity) | M.Lke1207ORF5200P | |
| 5205 | 281 aa hypothetical protein | |||
| 10095 | 766 aa hypothetical protein | |||
| 10100 | S | S.Lpa1347ORF5085P (60% identity) | S.Lke1207ORF10105P | |
| 10105 | M | M.Lhe8105ORF3945P (99% identity) | M.Lke1207ORF10105P | |
| 10110 | R | LheDORF1480P (99% identity) | Lke1207ORF10105P | |
| 10115 | zinc-ribbon domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 105 | MgtC/SapB family protein | |||
| 115 | RM | LamL6ORF7405P (73% identity) | Lke1207ORF115P | |
| 120 | Mrr restriction system protein | |||
| 135 | DUF2971 domain-containing protein | |||
| 140 | M | M.LamL6ORF7420P (66% identity) | M.Lke1207ORF140P | |
| 145 | 62 aa hypothetical protein | |||
| 1425 | 311 aa hypothetical protein | |||
| 1430 | RM | LkeM1ORF10490P (99% identity) | Lke1207ORF1430P | |
| 1435 | 149 aa hypothetical protein | |||
| 1475 | 94 aa hypothetical protein | |||
| 1480 | RM | LkeM1ORF10540P (99% identity) | Lke1207ORF1480P | |
| 1485 | 250 aa hypothetical protein | |||
| 3485 | BREX system P-loop protein BrxC | |||
| 3490 | RM | Lhe1004ORF12250P (87% identity) | Lke1207ORF3490P | |
| 3495 | 1239 aa hypothetical protein | |||
| 3610 | helix-turn-helix transcriptional regulator | |||
| 3615 | M | M.LreLB1ORF8620P (40% identity) | M1.Lke1207ORF3615P | |
| 3620 | M | M2.Ppe2734ORF1423P (97% identity) | M2.Lke1207ORF3615P | |
| 3625 | RM | Lre384ORF635BP (96% identity) | Lke1207ORF3615P | |
| 3630 | DUF262 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8055 | 430 aa hypothetical protein | |||
| 8060 | R | LkeM1ORF6395P (96% identity) | Lke1207ORF8065P | |
| 8065 | M | M.Lfe16ORF9405P (91% identity) | M.Lke1207ORF8065P | |
| 8070 | C | C.LkeZW3ORF1121P (97% identity) | C.Lke1207ORF8065P | |
| 8075 | DUF2326 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 330 | amino acid permease | |||
| 335 | R | LkeZW3ORF1630P (99% identity) | Lke1207ORF335P | |
| 340 | beta-lactamase family protein | |||
| 5205 | 281 aa hypothetical protein | |||
| 5210 | R | LkeZW3MrrP (98% identity) | Lke1207MrrP | |
| 5215 | proline iminopeptidase-family hydrolase | |||
| 10085 | DUF3644 domain-containing protein | |||
| 10090 | R | LplY21MrrP (84% identity) | Lke1207Mrr2P | |
| 10095 | 766 aa hypothetical protein | |||