Tessaracoccus defluvii JCM 17540 |
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Putative Tessaracoccus defluvii JCM 17540 RM systems
Ref: Hyun,D.-W. and Bae,J.-W. unpublished
REBASE ref # 30257
Complete sequence: 3,864,792 bp
GenBank #: CP060789
REBASE acronym: Tde17540
Org_num: 44535
All begin H9L22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1065 | pentapeptide repeat-containing protein | |||
| ??? | R | TspT2530ORF2705P (49% identity) | Tde17540ORF1070P | |
| 1080 | S | S1.MspB185ORF11305P (46% identity) | S.Tde17540ORF1070P | |
| 1085 | 158 aa hypothetical protein | |||
| 1155 | IS110 family transposase | |||
| 1160 | M | M.TspT2530ORF2705P (63% identity) | M.Tde17540ORF1160P | |
| 1165 | alpha-L-fucosidase | |||
| 14655 | DUF3696 domain-containing protein | |||
| 14660 | M | M.Myo36912ORF1931P (87% identity) | AAGNNNNCTG | M.Tde17540I |
| 14665 | S | S.Myo36912ORF1931P (43% identity) | AAGNNNNCTG | S.Tde17540I |
| 14670 | TIGR02391 family protein | |||
| 14675 | R | Myo36912ORF1931P (89% identity) | AAGNNNNCTG | Tde17540IP |
| 14680 | DUF2130 domain-containing protein | |||
| 15615 | 77 aa hypothetical protein | |||
| 15620 | M | M.Tla7ORF410P (94% identity) | ACAYNNNNATC | M.Tde17540II |
| 15625 | S | S.PspHDW11ORF10405P (27% identity) | ACAYNNNNATC | S.Tde17540II |
| 15630 | PIN domain-containing protein | |||
| 15730 | ribbon-helix-helix protein, CopG family | |||
| 15735 | R | Tla7ORF410P (96% identity) | Tde17540ORF15735P | |
| 15740 | MFS transporter | |||
| 17450 | 471 aa hypothetical protein | |||
| 17455 | M | M.Bsp1595ORF3260P (90% identity) | M.Tde17540ORF17455P | |
| 17460 | S | S.Bsp1595ORF3260P (95% identity) | S.Tde17540ORF17455P | |
| 17465 | restriction endonuclease | |||
| 17470 | R | Bsp1595ORF3260P (91% identity) | Tde17540ORF17455P | |
| 17475 | prepilin peptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6155 | TetR/AcrR family transcriptional regulator | |||
| 6160 | M | M.Bsp051ORF12940P (95% identity) | M.Tde17540ORF6160P | |
| 6165 | R | MspS16ORFEP (91% identity) | Tde17540ORF6160P | |
| 6170 | ATP-binding protein | |||
| 7590 | ATP-binding protein | |||
| 7595 | R | Asp27ATORF13065P (91% identity) | Tde17540ORF7595P | |
| 7600 | adenine-specific methyltransferase EcoRI family | |||
| 7595 | DUF262 domain-containing protein | |||
| 7600 | M | M.Asp27ATORF13060P (70% identity) | M.Tde17540ORF7600P | |
| 7605 | 297 aa hypothetical protein | |||
| 14080 | transposase | |||
| 14085 | M | M.Cmi1R13ORFAP (66% identity) | M.Tde17540ORF14085P | |
| 14090 | helix-turn-helix transcriptional regulator | |||
| 14095 | R | CmiR11ORF15765P (69% identity) | Tde17540ORF14085P | |
| 14100 | IS1380 family transposase | |||
| 15270 | VOC family protein | |||
| 15275 | RM | TspM15ORF9285AP (63% identity) | Tde17540ORF15275P | |
| 15280 | 397 aa hypothetical protein | |||
| 17290 | DEAD/DEAH box helicase | |||
| 17295 | RM | Tsp1865ORF1300P (59% identity) | Tde17540ORF17295P | |
| 17300 | RNA-directed DNA polymerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8975 | cysteine synthase A | |||
| 8980 | R | CspSO1ORFFP (55% identity) | Tde17540ORF8980P | |
| 8985 | (deoxy)nucleoside triphosphate | |||