Salmonella enterica subsp. enterica serovar Schwarzengrund WAPHL-SAL-A00375 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Schwarzengrund WAPHL-SAL-A00375 RM systems
Ref: Tyson,G.H. et al. Antimicrob. Agents Chemother. (2020) In press
REBASE ref # 30787
| Sequence length: | GenBank #: | |
| Chromosome: | 4,754,451 bp | CP048301 |
| plasmid p28945-1: | 100,159 bp | CP048302 |
| plasmid p28945-2: | 293,078 bp | CP048303 |
REBASE acronym: Sen375
Org_num: 44780
All begin GZ070_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1750 | cell division protein DamX | |||
| 1755 | M | M.StyTDamP (100% identity) | GATC | M.Sen375DamP |
| 1760 | ribulose-phosphate 3-epimerase | |||
| 2240 | DUF2556 domain-containing protein | |||
| 2245 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen375ORF2245P |
| 2250 | DNA-binding transcriptional regulator Fis | |||
| 8925 | phosphohydrolase | |||
| 8930 | M | M.Ssp918DcmP (100% identity) | CCWGG | M.Sen375DcmP |
| 8935 | V | V.StyUK1DcmP (100% identity) | V.Sen375DcmP | |
| 8940 | drug/metabolite exporter YedA | |||
| 16050 | NinE family protein | |||
| 16055 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Sen375ORF16055P |
| 16060 | recombination protein NinB | |||
| 19380 | DeoR family transcriptional regulator | |||
| 19385 | R | Ssp918ORF19230P (99% identity) | Sen375ORF19390P | |
| ??? | M | M.Sens679ORF19185P (100% identity) | M.Sen375ORF19390P | |
| 19395 | DNA helicase | |||
| plasmid p28945-1 | ||||
| 23100 | 98 aa hypothetical protein | |||
| 23105 | M | M.Sen527ORF25750P (100% identity) | M.Sen375ORF23105P | |
| 23110 | 73 aa hypothetical protein | |||
| plasmid p28945-2 | ||||
| 24480 | thermonuclease family protein | |||
| 24485 | M | M.YpsF1ORFCP (100% identity) | M.Sen375ORF24485P | |
| 24490 | DUF1173 domain-containing protein | |||
| 24795 | 108 aa hypothetical protein | |||
| 24800 | M | M.YpsF1ORFBP (100% identity) | M.Sen375ORF24800P | |
| 24805 | 202 aa hypothetical protein | |||
| 24930 | DNA-binding protein | |||
| 24935 | M | M.YpsF1ORFDP (100% identity) | M.Sen375ORF24935P | |
| 24940 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17050 | 33 aa hypothetical protein | |||
| 17055 | R | Sens679ORF16435P (100% identity) | CAGAG | Sen375ORF17060P |
| 17060 | M | M.Sens679ORF16435P (100% identity) | CAGAG | M.Sen375ORF17060P |
| 17065 | MFS transporter | |||