Rhodobacteraceae bacterium isolate PB-A2_LS01-2011-a |
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Putative Rhodobacteraceae bacterium isolate PB-A2_LS01-2011-a RM systems
Ref: Wilbanks,E.G. unpublished
REBASE ref # 31234
GenBank #: JAERIM000000000
REBASE acronym: RbaPBA2a
Org_num: 44528
All begin JKP97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17585 | type II toxin-antitoxin system VapC family | |||
| 17590 | R | RspA2ORFPP (95% identity) | RbaPBA2aORF17595P | |
| ??? | S | S.Kba3096ORFAP (13% identity) | S.RbaPBA2aORF17595P | |
| 17595 | M | M.RspA2ORFPP (100% identity) | M.RbaPBA2aORF17595P | |
| 14455 | AAA family ATPase | |||
| 14460 | S | S.EspC5ORFCP (52% identity) | S.RbaPBA2aORF14465P | |
| 14465 | M | M.RspA2ORFLP (100% identity) | M.RbaPBA2aORF14465P | |
| 14470 | R | RspA2ORFLP (100% identity) | RbaPBA2aORF14465P | |
| 14475 | WYL domain-containing protein | |||
| 7800 | 129 aa hypothetical protein | |||
| 7805 | R | RspA2ORFDP (100% identity) | RbaPBA2aORF7820P | |
| 7810 | S | S.RspA2ORFDP (100% identity) | S.RbaPBA2aORF7820P | |
| 7815 | DUF4917 family protein | |||
| 7820 | M | M.RspA2ORFDP (100% identity) | M.RbaPBA2aORF7820P | |
| 7825 | AraC family transcriptional regulator | |||
| 10315 | 584 aa hypothetical protein | |||
| 10320 | S | S.RspA2ORFHP (100% identity) | GACVNNNNTTTC | S.RbaPBA2aI |
| 10325 | DUF86 domain-containing protein | |||
| 3695 | 963 aa hypothetical protein | |||
| 3700 | R | RspA2ORFD1P (98% identity) | RbaPBA2aORF3715P | |
| 3705 | NYN domain-containing protein | |||
| 3710 | S | S.RspA2ORFD1P (100% identity) | S.RbaPBA2aORF3715P | |
| 3715 | M | M.RspA2ORFD1P (100% identity) | M.RbaPBA2aORF3715P | |
| 3720 | RES family NAD+ phosphorylase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19805 | IS110 family transposase | |||
| 19810 | RM | RspA2ORFVP (95% identity) | RbaPBA2aORF19810P | |
| 19815 | 233 aa hypothetical protein | |||
| 20835 | IS110 family transposase | |||
| 20840 | M | M1.RspA2ORFXP (93% identity) | M.RbaPBA2aORF20840P | |
| 20845 | site-specific DNA-methyltransferase | |||
| ??? | RM | RspA2ORFA1P (100% identity) | RbaPBA2aORF21640P | |
| 21645 | 123 aa hypothetical protein | |||
| ??? | M | M.RspA2ORFKP (97% identity) | M.RbaPBA2aORF12670P | |
| 12675 | DegT/DnrJ/EryC1/StrS family aminotransferase | |||
| 18250 | M | M.RspA2ORFQP (99% identity) | M.RbaPBA2aORF18250P | |
| 18255 | DNA cytosine methyltransferase | |||
| 18250 | site-specific DNA-methyltransferase | |||
| 18255 | M | M.Mme286ORFNP (87% identity) | M.RbaPBA2aORF18255P | |
| 18260 | 72 aa hypothetical protein | |||
| 20840 | DNA cytosine methyltransferase | |||
| 20845 | M | M.RbaPBA2bORF9250P (99% identity) | M.RbaPBA2aORF20845P | |
| 20850 | ATPase | |||
| 14905 | DEAD/DEAH box helicase | |||
| 14910 | RM | RspA2ORFMP (100% identity) | RbaPBA2aORF14910P | |
| 14915 | 262 aa hypothetical protein | |||
| 20775 | 73 aa hypothetical protein | |||
| 20780 | M | M1.RspA2ORFWP (92% identity) | M.RbaPBA2aORF20780P | |
| 20785 | site-specific DNA-methyltransferase | |||
| 8070 | nicotinate phosphoribosyltransferase | |||
| 8075 | M | M.RspA2ORFEP (100% identity) | M.RbaPBA2aORF8075P | |
| 8080 | R | LposN51ORFEP (13% identity) | RbaPBA2aORF8075P | |
| 8085 | nicotinate phosphoribosyltransferase | |||
| 20780 | DNA cytosine methyltransferase | |||
| ??? | M | M2.RspA2ORFWP (100% identity) | M.RbaPBA2aORF20785P | |
| 18490 | 132 aa hypothetical protein | |||
| 18495 | M | M.RspA2ORFRP (100% identity) | M.RbaPBA2aORF18495P | |
| 18500 | V | V.RspA2ORFRP (77% identity) | V.RbaPBA2aORF18495P | |
| 18505 | HNH endonuclease | |||
| 16785 | AAA family ATPase | |||
| 16790 | M | M.Osp13590DndCP (90% identity) | M.RbaPBA2aDndCP | |
| 16795 | 67 aa hypothetical protein | |||
| 5100 | Hint domain-containing protein | |||
| ??? | M | M.RspA2ORFCP (100% identity) | RGATCY | M.RbaPBA2aII |
| 5110 | aspartate--tRNA ligase | |||
| 3475 | NERD domain-containing protein | |||
| 3480 | M | M.RspA2ORFBP (97% identity) | M.RbaPBA2aORF3480P | |
| 3485 | V | V.RspA2ORFBP (72% identity) | V.RbaPBA2aORF3480P | |
| 3490 | 84 aa hypothetical protein | |||
| 11765 | BREX-1 system phosphatase PglZ type A | |||
| 11770 | RM | RspA2ORFIP (100% identity) | RbaPBA2aORF11770P | |
| 11775 | BREX system P-loop protein BrxC | |||
| 16795 | 67 aa hypothetical protein | |||
| 16800 | M | M.Osp13590DndDP (93% identity) | M.RbaPBA2aDndDP | |
| 16805 | DUF87 domain-containing protein | |||
| 12315 | 74 aa hypothetical protein | |||
| ??? | M | M1.RspA2ORFJP (100% identity) | M.RbaPBA2aORF12320P | |
| 12325 | site-specific DNA-methyltransferase | |||
| 12320 | DNA cytosine methyltransferase | |||
| 12325 | M | M2.RspA2ORFJP (100% identity) | M.RbaPBA2aORF12325P | |
| 12330 | 142 aa hypothetical protein | |||
| 15920 | 73 aa hypothetical protein | |||
| ??? | M | M.RbaPBA2bORF5150P (61% identity) | M.RbaPBA2aORF15925P | |
| 9555 | 72 aa hypothetical protein | |||
| 9560 | M | M.RspA2ORFFP (79% identity) | M.RbaPBA2aORF9560P | |
| 9565 | DNA modification methylase | |||
| 9560 | DNA cytosine methyltransferase | |||
| 9565 | M | M.RspA2ORFGP (100% identity) | M.RbaPBA2aORF9565P | |
| 9570 | HNH endonuclease | |||
| 3680 | 71 aa hypothetical protein | |||
| 3685 | M | M1.RspA2ORFC1P (88% identity) | M1.RbaPBA2aORF3685P | |
| 3690 | M | M2.RspA2ORFC1P (91% identity) | M2.RbaPBA2aORF3685P | |
| 3695 | 963 aa hypothetical protein | |||
| 3730 | 223 aa hypothetical protein | |||
| 3735 | M | M.RspA2ORFE1P (80% identity) | M.RbaPBA2aORF3735P | |
| 3740 | helix-turn-helix domain-containing protein | |||
| 520 | GNAT family N-acetyltransferase | |||
| 525 | M | M.RspA2I (100% identity) | GANTC | M.RbaPBA2aIII |
| 530 | ribonuclease HII | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17405 | ATPase | |||
| 17410 | M | M.RspA2ORFOP (100% identity) | M.RbaPBA2aORF17410P | |
| 17420 | MBL fold metallo-hydrolase | |||
| 21240 | type II toxin-antitoxin system Phd/YefM family | |||
| 21245 | M | M.RspA2ORFZP (100% identity) | M.RbaPBA2aORF21245P | |
| ??? | R | RspA2ORFZP (100% identity) | RbaPBA2aORF21245P | |
| 19205 | 61 aa hypothetical protein | |||
| 19210 | R | RspA2ORFTP (100% identity) | RbaPBA2aORF19210P | |
| 18945 | type II toxin-antitoxin system Phd/YefM family | |||
| 18950 | M | M.RspA2ORFSP (100% identity) | M.RbaPBA2aORF18950P | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22000 | R | RspA2MrrP (99% identity) | RbaPBA2aMrrP | |
| 17200 | DUF488 domain-containing protein | |||
| 17205 | R | RspA2McrBP (95% identity) | RbaPBA2aMcrBP | |
| 17210 | R | RspA2McrCP (100% identity) | RbaPBA2aMcrCP | |
| 17220 | IS200/IS605 family transposase | |||