|
Putative Oceanicaulis species PB-A1_LS01-2011-a RM systems
Ref: Wilbanks,E.G. unpublished
REBASE ref # 17943
GenBank #: JAERIL000000000
REBASE acronym: OspA1
Org_num: 13579
All begin JKP96_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
590 | site-specific integrase | |||
595 | R | Mme286ORFR1P (100% identity) | ATGNNNNNNCTGG | OspA1IIP |
600 | restriction endonuclease | |||
605 | 131 aa hypothetical protein | |||
610 | 128 aa hypothetical protein | |||
615 | S | S.Mme286ORFR1P (100% identity) | ATGNNNNNNCTGG | S.OspA1II |
??? | M | M.Mme286ORFR1P (100% identity) | ATGNNNNNNCTGG | M.OspA1II |
625 | 176 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
15595 | ribonuclease HII | |||
??? | M | M.OspA1I (96% identity) | GANTC | M.OspA1ORF15600P |
15605 | A/G-specific adenine glycosylase | |||
15595 | ribonuclease HII | |||
??? | M | M.OspA1ORF15600P (96% identity) | GANTC | M.OspA1I |
15605 | A/G-specific adenine glycosylase | |||
6570 | 128 aa hypothetical protein | |||
6575 | M | M.KvuY25ORF2025P (55% identity) | GATC | M.OspA1ORF6575P |
6580 | AAA family ATPase | |||
7290 | 75 aa hypothetical protein | |||
7295 | M | M.Mme286ORFZ1P (100% identity) | M.OspA1ORF7295P | |
7300 | 163 aa hypothetical protein | |||
4620 | helix-turn-helix domain-containing protein | |||
??? | R | Mme286ORFE2P (100% identity) | RGATCY | OspA1IIIP |
??? | M | M.Mme286ORFF2P (100% identity) | RGATCY | M.OspA1III |
4635 | DGQHR domain-containing protein | |||
5240 | ATP-binding protein | |||
5245 | V | V.NinC115ORF10163P (59% identity) | V.OspA1ORF5250P | |
5250 | M | M.NinC115ORF10163P (68% identity) | M.OspA1ORF5250P | |
5255 | type II toxin-antitoxin system Phd/YefM family | |||
4065 | 299 aa hypothetical protein | |||
4070 | M | M.HbaML37ORF10665P (69% identity) | M.OspA1ORF4070P | |
4075 | V | V.HbaML37ORF10665P (62% identity) | V.OspA1ORF4070P | |
4080 | LysR family transcriptional regulator | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
??? | M | M.HbaIII (25% identity) | M.OspA1ORF14655P | |
14660 | 378 aa hypothetical protein | |||
??? | M | M.AflD11M2ORF11305P (28% identity) | M.OspA1ORF15540P | |
15545 | R | AflD11M2ORF11305P (62% identity) | OspA1ORF15540P | |
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
595 | type I restriction endonuclease subunit R | |||
600 | R | Pab2014MrrP (64% identity) | OspA1MrrP | |
605 | 131 aa hypothetical protein |