Oscillibacter species NSJ-62 |
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Putative Oscillibacter species NSJ-62 RM systems
Ref: Liu,C. and Sun,Q. unpublished
REBASE ref # 31162
Complete sequence: 2,823,823 bp
GenBank #: CP060490
REBASE acronym: OspNSJ62
Org_num: 44374
All begin H8790_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3670 | 330 aa hypothetical protein | |||
| 3675 | M | M.PmeBin529ORFBP (63% identity) | M.OspNSJ62ORF3675P | |
| 3680 | S | S.AbaDC25ORF8480P (37% identity) | S.OspNSJ62ORF3675P | |
| 3685 | ATP-binding protein | |||
| 3690 | R | PmeBin529ORFBP (60% identity) | OspNSJ62ORF3675P | |
| 3695 | M48 family metallopeptidase | |||
| 3730 | DUF2971 domain-containing protein | |||
| 3735 | S | S.RspFMBCY1ORF6635P (57% identity) | S.OspNSJ62ORF3740P | |
| 3740 | M | M.PsaSt28ORF18090P (82% identity) | M.OspNSJ62ORF3740P | |
| 3745 | 167 aa hypothetical protein | |||
| 3750 | R | Lru25644ORF6910P (84% identity) | OspNSJ62ORF3740P | |
| 3755 | helix-turn-helix transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 510 | PrgI family protein | |||
| 515 | M | M.Oba81ORF17080P (100% identity) | M.OspNSJ62ORF515P | |
| 520 | site-specific DNA-methyltransferase | |||
| 515 | 184 aa hypothetical protein | |||
| 520 | M | M.Bsp81119ORF18400P (99% identity) | M.OspNSJ62ORF520P | |
| 525 | septation protein SpoVG family protein | |||
| 2195 | DUF3849 domain-containing protein | |||
| 2200 | M | M.PmeBin179ORFGP (99% identity) | M.OspNSJ62ORF2200P | |
| 2205 | DUF3848 domain-containing protein | |||
| 3300 | 98 aa hypothetical protein | |||
| 3305 | M | M.ObaSt41ORF22270P (96% identity) | M.OspNSJ62ORF3305P | |
| 3310 | amidoligase family protein | |||
| 3355 | 108 aa hypothetical protein | |||
| 3360 | M | M.ObaSt41ORF22370P (96% identity) | M.OspNSJ62ORF3360P | |
| 3365 | 109 aa hypothetical protein | |||
| 3785 | integrase | |||
| 3790 | M | M.ObaC33ORF8485P (75% identity) | M.OspNSJ62ORF3790P | |
| 3795 | DGQHR domain-containing protein | |||
| 3950 | 87 aa hypothetical protein | |||
| 3955 | M | M.PmeBin49ORFBP (99% identity) | M.OspNSJ62ORF3955P | |
| 3960 | amidoligase family protein | |||
| 4015 | 196 aa hypothetical protein | |||
| 4020 | M | M.Ibu5215ORF1432P (100% identity) | M.OspNSJ62ORF4020P | |
| 4025 | plasmid mobilization relaxosome protein MobC | |||
| 5260 | PrgI family protein | |||
| 5265 | M | M1.PmeBin387ORFDP (96% identity) | M.OspNSJ62ORF5265P | |
| 5270 | site-specific DNA-methyltransferase | |||
| 5265 | DNA methyltransferase | |||
| 5270 | M | M.OspMM59ORF25420P (97% identity) | M.OspNSJ62ORF5270P | |
| 5275 | 288 aa hypothetical protein | |||
| 5445 | antirestriction protein ArdA | |||
| 5450 | M | M.PmeBin263ORFAP (97% identity) | M.OspNSJ62ORF5450P | |
| 5455 | 113 aa hypothetical protein | |||
| 10620 | chaperonin GroEL | |||
| 10625 | M | M.Ibu5215ORF2675P (83% identity) | M.OspNSJ62ORF10625P | |
| 10630 | 99 aa hypothetical protein | |||
| 10630 | 99 aa hypothetical protein | |||
| 10635 | R | Ibu5215ORF2676P (88% identity) | OspNSJ62ORF10635P | |
| 10640 | 60 aa hypothetical protein | |||
| 11265 | 289 aa hypothetical protein | |||
| 11270 | M | M.PmeBin387ORFBP (29% identity) | M.OspNSJ62ORF11270P | |
| 11275 | NUDIX hydrolase | |||
| 12665 | DUF1538 domain-containing protein | |||
| 12670 | R | SspNJN17ORF5725P (51% identity) | OspNSJ62ORF12675P | |
| 12675 | M | M.Rfl3010I (52% identity) | M.OspNSJ62ORF12675P | |
| 12680 | extracellular solute-binding protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2005 | nucleotidyltransferase domain-containing | |||
| 2010 | R | Lba3038ORF6745P (65% identity) | OspNSJ62ORF2015P | |
| 2015 | M | M.Lba3038ORF6745P (51% identity) | M.OspNSJ62ORF2015P | |
| 2020 | superoxide dismutase | |||