Variovorax species PAMC26660 |
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Putative Variovorax species PAMC26660 RM systems
Ref: Park,H. unpublished
REBASE ref # 21582
Complete sequence: 7,388,698 bp
GenBank #: CP060295
REBASE acronym: Vsp26660
Org_num: 44408
All begin H7F35_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16260 | TRAP transporter small permease | |||
| 16265 | M | M.PavBLS4ORF6960P (91% identity) | M.Vsp26660ORF16265P | |
| 16270 | virulence RhuM family protein | |||
| 16275 | anticodon nuclease | |||
| 16280 | S | S.PaqCORF15590P (44% identity) | S.Vsp26660ORF16265P | |
| 16285 | R | AspNA3ORF9795P (85% identity) | Vsp26660ORF16265P | |
| 16290 | nitronate monooxygenase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5565 | 123 aa hypothetical protein | |||
| 5570 | M | M.VspNM96ORF28970P (98% identity) | M.Vsp26660ORF5570P | |
| 5575 | Com family DNA-binding transcriptional | |||
| 21325 | excisionase | |||
| 21330 | M | M.AchHR1ORF9240P (56% identity) | M.Vsp26660ORF21330P | |
| 21335 | 79 aa hypothetical protein | |||
| 22020 | helix-turn-helix domain-containing protein | |||
| 22025 | M | M.Rso10319ORF7175P (65% identity) | M.Vsp26660ORF22025P | |
| 22030 | 97 aa hypothetical protein | |||
| 26370 | TetR family transcriptional regulator | |||
| ??? | M | M.PaeLo21ORF27545P (46% identity) | M.Vsp26660ORF26375P | |
| 26385 | 319 aa hypothetical protein | |||
| 27210 | phage portal protein | |||
| 27215 | M | M.Vsp026ORF20950P (93% identity) | M.Vsp26660ORF27215P | |
| 27220 | 334 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25365 | 171 aa hypothetical protein | |||
| 25370 | R | BbrKU1201McrCP (64% identity) | Vsp26660McrCP | |
| 25375 | R | PaePD2dMcrB2P (65% identity) | Vsp26660McrBP | |
| 25380 | IS3 family transposase | |||