Lactobacillus crispatus 1D |
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Putative Lactobacillus crispatus 1D RM systems
Ref: Hassan,H.M. unpublished
REBASE ref # 30966
Complete sequence: 2,349,358 bp
GenBank #: CP047415
REBASE acronym: Lcr1D
Org_num: 44303
All begin GTO85_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6175 | Mrr restriction system protein | |||
| ??? | S | S.Lcr1c83ORFBP (56% identity) | S2.Lcr1DORF6195P | |
| 6185 | tyrosine-type recombinase/integrase | |||
| 6190 | S | S1.LcrDC211ORF5580P (62% identity) | S1.Lcr1DORF6195P | |
| 6195 | M | M.Lcr1c83ORFBP (99% identity) | M.Lcr1DORF6195P | |
| 6200 | R | Lcr1c83ORFBP (99% identity) | Lcr1DORF6195P | |
| 6205 | CPBP family intramembrane metalloprotease | |||
| 6455 | DUF262 domain-containing protein | |||
| 6460 | R | LcrC037ORFEP (97% identity) | Lcr1DORF6480P | |
| 6465 | S | S.LcrC037ORFDP (49% identity) | S2.Lcr1DORF6480P | |
| 6470 | tyrosine-type recombinase/integrase | |||
| 6475 | S | S1.LheLH10ORF4960P (48% identity) | S1.Lcr1DORF6480P | |
| 6480 | M | M.LfeLB55ORF4910P (72% identity) | M.Lcr1DORF6480P | |
| 6485 | 264 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 170 | tyrosine-type recombinase/integrase | |||
| 175 | M | M.Lul93C1ORF150P (100% identity) | M.Lcr1DORF175P | |
| 180 | 296 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 390 | amino acid permease | |||
| 395 | R | LcrPMC201ORF11375P (99% identity) | Lcr1DORF395P | |
| 400 | serine hydrolase | |||
| 6170 | DUF3883 domain-containing protein | |||
| 6175 | R | LspC25MrrP (100% identity) | Lcr1DMrrP | |
| 6180 | restriction endonuclease subunit S | |||