Lactobacillus salivarius 2D |
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Putative Lactobacillus salivarius 2D RM systems
Ref: Hassan,H.M. unpublished
REBASE ref # 30966
| Sequence length: | GenBank #: | |
| Chromosome: | 1,700,858 bp | CP047412 |
| plasmid unnamed1: | 248,523 bp | CP047413 |
REBASE acronym: Lsa2D
Org_num: 44302
All begin GTO84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed1 | ||||
| 8640 | 80 aa hypothetical protein | |||
| 8645 | M | M.LsaL28ORF7040P (97% identity) | M.Lsa2DORF8645P | |
| 8650 | S | S1.Lsa3154ORF38P (98% identity) | S.Lsa2DORF8645P | |
| 8655 | tyrosine-type recombinase/integrase | |||
| 9535 | 349 aa hypothetical protein | |||
| 9540 | S | S4.Lsa14759ORF9325P (100% identity) | S.Lsa2DORF9545P | |
| 9545 | M | M.Lsa212ORF8405P (99% identity) | M.Lsa2DORF9545P | |
| 9550 | N-6 DNA methylase | |||
| 9545 | N-6 DNA methylase | |||
| 9550 | M | M.Lsa212ORF8400P (99% identity) | M.Lsa2DORF9550P | |
| 9555 | S | S3.Lsa212ORF8400P (93% identity) | S1.Lsa2DORF9550P | |
| 9560 | S | S1.Lsa212ORF8400P (87% identity) | S2.Lsa2DORF9550P | |
| 9565 | tyrosine-type recombinase/integrase | |||
| 9570 | S | S2.Lsa212ORF8400P (84% identity) | S3.Lsa2DORF9550P | |
| 9575 | 320 aa hypothetical protein | |||
| 9580 | 193 aa hypothetical protein | |||
| 9585 | R | Lsa212ORF8400P (100% identity) | Lsa2DORF9550P | |
| 9590 | 66 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1945 | helix-turn-helix domain-containing protein | |||
| 1950 | RM | LdesunORF5605P (65% identity) | Lsa2DORF1950P | |
| 1955 | DEAD/DEAH box helicase family protein | |||
| plasmid unnamed1 | ||||
| 8585 | 60 aa hypothetical protein | |||
| 8590 | M | M.Lje702ORF9915P (70% identity) | M.Lsa2DORF8590P | |
| 8595 | 1065 aa hypothetical protein | |||
| 8605 | DEAD/DEAH box helicase family protein | |||
| 8610 | RM | LsaL28ORF7065P (70% identity) | Lsa2DORF8610CP | |
| 8615 | RM | Lsa840ORF1876P (100% identity) | Lsa2DORF8610BP | |
| 8620 | RM | LsaGJ24ORF1799P (98% identity) | Lsa2DORF8610AP | |
| 8625 | 249 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3630 | NUDIX domain-containing protein | |||
| 3635 | R | Lsa212ORF2640P (99% identity) | Lsa2DORF3635P | |
| 3640 | acetyltransferase | |||
| 6980 | IMP dehydrogenase | |||
| ??? | R | LsaZSA5ORF7915P (99% identity) | Lsa2DORF6985P | |
| 6990 | protein-tyrosine-phosphatase | |||