Citrobacter freundii N18-04085 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Citrobacter freundii N18-04085 RM systems
Ref: Gobeille Pare,S. et al. J. Antimicrob. Chemother. (2020) In press
REBASE ref # 31103
| Sequence length: | GenBank #: | |
| Chromosome: | 5,167,126 bp | CP047275 |
| plasmid pCf4085: | 282,258 bp | CP047276 |
REBASE acronym: Cfr4085
Org_num: 44141
All begin F3084_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 395 | serine/threonine protein kinase | |||
| 400 | M | M.Cfr4128ORF400P (100% identity) | M.Cfr4085ORF400P | |
| 405 | S | S.Cfr4128ORF400P (100% identity) | S.Cfr4085ORF400P | |
| 410 | DUF4268 domain-containing protein | |||
| 415 | R | Cfr4128ORF400P (100% identity) | Cfr4085ORF400P | |
| 420 | 479 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1870 | cell division protein DamX | |||
| 1875 | M | M.Eco5172DamP (100% identity) | GATC | M.Cfr4085DamP |
| 1880 | ribulose-phosphate 3-epimerase | |||
| 2415 | DUF2556 domain-containing protein | |||
| 2420 | M | M.Eco5172ORF4078P (100% identity) | ATGCAT | M.Cfr4085ORF2420P |
| 2425 | tyrosine-type recombinase/integrase | |||
| 9655 | phosphohydrolase | |||
| 9660 | M | M.CspSL156ORF9755P (100% identity) | CCWGG | M.Cfr4085ORF9660P |
| 9665 | V | V.CyoL6ORF9385P (100% identity) | V.Cfr4085ORF9660P | |
| 9670 | drug/metabolite exporter YedA | |||
| 10200 | GntR family transcriptional regulator | |||
| ??? | M | M.Cfr4128ORF10405P (100% identity) | M.Cfr4085ORF10205P | |
| 10210 | 72 aa hypothetical protein | |||
| 20135 | DUF1317 family protein | |||
| ??? | M | M.Cfr4128ORF20310P (100% identity) | M.Cfr4085ORF20140P | |
| 20145 | DUF4060 family protein | |||
| 23155 | RusA family crossover junction | |||
| 23160 | M | M.Cfr4128ORF23310P (100% identity) | M.Cfr4085ORF23160P | |
| 23165 | GntR family transcriptional regulator | |||
| plasmid pCf4085 | ||||
| 26355 | AAA family ATPase | |||
| ??? | M | M.Kpn3892ORF26955P (100% identity) | CCWGG | M.Cfr4085ORF26360P |
| 26365 | R | Kpn9645ORFAP (100% identity) | CCWGG | Cfr4085ORF26360P |
| 26370 | tyrosine-type recombinase/integrase | |||
| 26390 | DNA breaking-rejoining protein | |||
| 26395 | M | M.Kpni11ayORF5166P (100% identity) | M.Cfr4085ORF26395P | |
| 26400 | 73 aa hypothetical protein | |||