Escherichia coli N18-04097 |
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Putative Escherichia coli N18-04097 RM systems
Ref: Gobeille Pare,S. et al. J. Antimicrob. Chemother. (2020) In press
REBASE ref # 31103
| Sequence length: | GenBank #: | |
| Chromosome: | 4,774,769 bp | CP047277 |
| plasmid pEc4097: | 256,225 bp | CP047278 |
REBASE acronym: Eco4097
Org_num: 44171
All begin F3052_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19395 | restriction endonuclease | |||
| 19400 | M | M.SflSTLE3ORF19325P (99% identity) | AGCANNNNNNTGA | M.Eco4097ORF19400P |
| 19405 | S | S.SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | S.Eco4097ORF19400P |
| 19410 | R | SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | Eco4097ORF19400P |
| 19415 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1630 | cell division protein DamX | |||
| 1635 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco4097DamP |
| 1640 | ribulose-phosphate 3-epimerase | |||
| 2255 | DUF2556 domain-containing protein | |||
| 2260 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco4097ORF2260P |
| 2265 | DNA-binding transcriptional regulator Fis | |||
| 8760 | phosphohydrolase | |||
| 8765 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco4097DcmP |
| 8770 | V | V.SsoSE61DcmP (100% identity) | V.Eco4097DcmP | |
| 8775 | drug/metabolite exporter YedA | |||
| 10750 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco4097ORF10755P | |
| 10760 | 60 aa hypothetical protein | |||
| 13870 | 92 aa hypothetical protein | |||
| 13875 | M | M.EcoW26ORF35400P (99% identity) | M.Eco4097ORF13875P | |
| 13880 | TrmB family transcriptional regulator | |||
| 14800 | replication endonuclease | |||
| 14805 | M | M.SflLIN17ORF14475P (100% identity) | GATC | M.Eco4097ORF14805P |
| 14810 | TraR/DksA family transcriptional regulator | |||
| plasmid pEc4097 | ||||
| 24035 | AAA family ATPase | |||
| ??? | M | M.Kpn3892ORF26955P (100% identity) | CCWGG | M.Eco4097ORF24040P |
| 24045 | R | Kpn9645ORFAP (100% identity) | CCWGG | Eco4097ORF24040P |
| 24050 | tyrosine-type recombinase/integrase | |||
| 24070 | DNA breaking-rejoining protein | |||
| 24075 | M | M.Kpni11ayORF5166P (100% identity) | M.Eco4097ORF24075P | |
| 24080 | 73 aa hypothetical protein | |||