Citrobacter freundii N18-04128 |
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Putative Citrobacter freundii N18-04128 RM systems
Ref: Gobeille Pare,S. et al. J. Antimicrob. Chemother. (2020) In press
REBASE ref # 31103
| Sequence length: | GenBank #: | |
| Chromosome: | 5,195,939 bp | CP047279 |
| plasmid pCf4128: | 262,422 bp | CP047280 |
REBASE acronym: Cfr4128
Org_num: 44142
All begin F3113_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 395 | serine/threonine protein kinase | |||
| 400 | M | M.Cfr4085ORF400P (100% identity) | M.Cfr4128ORF400P | |
| 405 | S | S.Cfr4085ORF400P (100% identity) | S.Cfr4128ORF400P | |
| 410 | DUF4268 domain-containing protein | |||
| 415 | R | Cfr4085ORF400P (100% identity) | Cfr4128ORF400P | |
| 420 | 132 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1890 | cell division protein DamX | |||
| 1895 | M | M.Eco5172DamP (100% identity) | GATC | M.Cfr4128DamP |
| 1900 | ribulose-phosphate 3-epimerase | |||
| 2435 | DUF2556 domain-containing protein | |||
| 2440 | M | M.Eco5172ORF4078P (100% identity) | ATGCAT | M.Cfr4128ORF2440P |
| 2445 | tyrosine-type recombinase/integrase | |||
| 9650 | phosphohydrolase | |||
| 9655 | M | M.CspSL156ORF9755P (100% identity) | CCWGG | M.Cfr4128ORF9655P |
| 9660 | V | V.CyoL6ORF9385P (100% identity) | V.Cfr4128ORF9655P | |
| 9665 | drug/metabolite exporter YedA | |||
| 9925 | 64 aa hypothetical protein | |||
| 9930 | M | M.Cfr13639ORF2342P (100% identity) | M.Cfr4128ORF9930P | |
| 9935 | 68 aa hypothetical protein | |||
| 10400 | GntR family transcriptional regulator | |||
| ??? | M | M.Cfr4085ORF10205P (100% identity) | M.Cfr4128ORF10405P | |
| 10410 | 72 aa hypothetical protein | |||
| 20305 | DUF1317 family protein | |||
| ??? | M | M.Cfr4085ORF20140P (100% identity) | M.Cfr4128ORF20310P | |
| 20315 | DUF4060 family protein | |||
| 23305 | RusA family crossover junction | |||
| 23310 | M | M.Cfr4085ORF23160P (100% identity) | M.Cfr4128ORF23310P | |
| 23315 | GntR family transcriptional regulator | |||
| plasmid pCf4128 | ||||
| 26415 | AAA family ATPase | |||
| ??? | M | M.Kpn3892ORF26955P (100% identity) | CCWGG | M.Cfr4128ORF26420P |
| 26425 | R | Kpn9645ORFAP (100% identity) | CCWGG | Cfr4128ORF26420P |
| 26430 | tyrosine-type recombinase/integrase | |||
| 26450 | DNA breaking-rejoining protein | |||
| 26455 | M | M.Kpni11ayORF5166P (100% identity) | M.Cfr4128ORF26455P | |
| 26460 | 73 aa hypothetical protein | |||