Escherichia coli 28.1 |
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Putative Escherichia coli 28.1 RM systems
Ref: Moffat,J. et al. unpublished
REBASE ref # 31111
| Sequence length: | GenBank #: | |
| Chromosome: | 4,801,284 bp | CP059931 |
| plasmid p3: | 56,201 bp | CP059934 |
| plasmid p5: | 5,571 bp | CP059936 |
REBASE acronym: Eco281
Org_num: 44163
All begin H5C74_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 800 | IS1-like element IS1A family transposase | |||
| 805 | R | EcoSF10ORF10475P (99% identity) | Eco281ORF815P | |
| 810 | S | S1.Eco3312ORF25965P (70% identity) | S.Eco281ORF815P | |
| 815 | M | M.EcoP44ORFAP (99% identity) | M.Eco281ORF815P | |
| 820 | GTPase family protein | |||
| 1920 | IS5/IS1182 family transposase | |||
| 1925 | R | EcoFL11ORF6520P (100% identity) | Eco281ORF1935P | |
| 1930 | S | S.EcoFL11ORF6520P (100% identity) | S.Eco281ORF1935P | |
| 1935 | M | M.EcoSF10ORF10475P (100% identity) | M.Eco281ORF1935P | |
| 1940 | GTPase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6780 | drug/metabolite exporter YedA | |||
| 6785 | V | V.EcosEC7DcmP (100% identity) | V.Eco281DcmP | |
| 6790 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.Eco281DcmP |
| 6795 | phosphohydrolase | |||
| 10295 | replication endonuclease | |||
| 10300 | M | M.Sen24760ORF10410P (100% identity) | GATC | M.Eco281ORF10300P |
| 10305 | TraR/DksA family transcriptional regulator | |||
| 13460 | DNA-binding transcriptional regulator Fis | |||
| 13465 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco281ORF13465P |
| 13470 | DUF2556 family protein | |||
| 14095 | ribulose-phosphate 3-epimerase | |||
| 14100 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco281DamP |
| 14105 | cell division protein DamX | |||
| plasmid p3 | ||||
| 24010 | recombinase family protein | |||
| 24015 | R | YpsR1ORFAP (100% identity) | CCWGG | Eco281ORF24020P |
| 24020 | M | M.SflLIN11ORF24665P (100% identity) | CCWGG | M.Eco281ORF24020P |
| 24025 | IS1 family transposase | |||
| plasmid p5 | ||||
| 24485 | Rop family plasmid primer RNA-binding protein | |||
| 24490 | R | SenL0026ORF25150P (95% identity) | CCNGG | Eco281ORF24495P |
| 24495 | M | M.SflFF34ORF24420P (100% identity) | CCNGG | M.Eco281ORF24495P |
| 24500 | MbeD family mobilization/exclusion protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18865 | restriction endonuclease subunit M | |||
| 18870 | M | M.EcoC0350ORF21250P (100% identity) | M.Eco281ORF18870P | |
| 18875 | R | SflN116ORF19490P (100% identity) | Eco281ORF18870P | |
| 18880 | 100 aa hypothetical protein | |||