Campylobacter jejuni C34 |
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Putative Campylobacter jejuni C34 RM systems
Ref: Yao,H. unpublished
REBASE ref # 31056
Complete sequence: 1,684,861 bp
GenBank #: CP059971
REBASE acronym: CjeC34
Org_num: 44134
All begin H4986_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5090 | NAD(P)-dependent alcohol dehydrogenase | |||
| 5095 | R | CjeC57ORF2445P (100% identity) | CjeC34ORF5110P | |
| 5100 | AAA family ATPase | |||
| 5105 | S | S.CjeNWORFGP (100% identity) | S.CjeC34ORF5110P | |
| 5110 | M | M.Csp7460ORF8595P (100% identity) | M.CjeC34ORF5110P | |
| 5115 | carboxymuconolactone decarboxylase family | |||
| 6580 | molecular chaperone DnaK | |||
| 6585 | M | M.CjeCGORF771P (100% identity) | TAAYNNNNNNCTG | M.CjeC34ORF6585P |
| 6590 | S | S.CjeP4549ORF3710P (100% identity) | TAAYNNNNNNCTG | S.CjeC34ORF6585P |
| 6595 | AAA family ATPase | |||
| 6600 | R | CjeP4549ORF3710P (100% identity) | TAAYNNNNNNCTG | CjeC34ORF6585P |
| 6605 | MBL fold metallo-hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1480 | PD-(D/E)XK nuclease family protein | |||
| 1485 | RM | CjeC57ORF4175P (100% identity) | CjeC34ORF1485P | |
| 1490 | AAA family ATPase | |||
| 1770 | 163 aa hypothetical protein | |||
| 1775 | RM | CjeC57ORF5420P (100% identity) | GCAAGG | CjeC34ORF1775P |
| 1780 | acetate kinase | |||
| 2750 | class I SAM-dependent methyltransferase | |||
| 2755 | RM | CjeC57ORF4830P (100% identity) | CjeC34ORF2755P | |
| 2760 | dihydroorotase | |||
| 2960 | 107 aa hypothetical protein | |||
| 2965 | M | M.CjeC57ORF4620P (100% identity) | RAATTY | M.CjeC34ORF2965P |
| 2970 | R | CjeJ017ORF2150P (100% identity) | RAATTY | CjeC34ORF2965P |
| 2975 | translation initiation factor IF-3 | |||
| 5835 | endonuclease MutS2 | |||
| 5840 | RM | CjeC41ORF7545P (100% identity) | CjeC34ORF5840P | |
| 5845 | cytochrome-c peroxidase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7895 | serine/threonine protein kinase | |||
| ??? | M | M.CjeC57ORF3680P (100% identity) | M.CjeC34ORF7900P | |
| 7905 | R | CjeC57ORF3680P (100% identity) | CjeC34ORF7900P | |
| 7910 | AcfC family glycoprotein adhesin PEB3 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2530 | metal ABC transporter permease | |||
| 2535 | R | CjeC57McrCP (100% identity) | CjeC34McrCP | |
| 2540 | R | CjeJ007McrBP (100% identity) | CjeC34McrBP | |
| 2545 | ribosome maturation factor RimP | |||