Escherichia coli RHB03-C16 |
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Putative Escherichia coli RHB03-C16 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 4,567,596 bp
GenBank #: CP058027
REBASE acronym: Eco3C16
Org_num: 44074
All begin HVV63_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3520 | 112 aa hypothetical protein | |||
| 3525 | R | Cfri0ORF4429P (99% identity) | Eco3C16ORF3535P | |
| 3530 | S | S.EcoYPE3ORF520P (68% identity) | S.Eco3C16ORF3535P | |
| 3535 | M | M.Cyo1ORFBP (98% identity) | M.Eco3C16ORF3535P | |
| 3540 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1650 | cell division protein DamX | |||
| 1655 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco3C16DamP |
| 1660 | ribulose-phosphate 3-epimerase | |||
| 2240 | DUF2556 family protein | |||
| 2245 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco3C16ORF2245P |
| 2250 | DNA-binding transcriptional regulator Fis | |||
| 3770 | DEAD/DEAH box helicase | |||
| 3775 | RM | Eco34C14ORF3785P (100% identity) | Eco3C16ORF3775P | |
| 8860 | phosphohydrolase | |||
| 8865 | M | M.EcosPA11DcmP (100% identity) | CCWGG | M.Eco3C16DcmP |
| 8870 | V | V.EcosPA11DcmP (100% identity) | V.Eco3C16DcmP | |
| 8875 | drug/metabolite exporter YedA | |||
| 18960 | IS1 family transposase | |||
| 18965 | R | EcoTZ118ORF2190P (100% identity) | GAAC | Eco3C16ORF18965P |
| 18970 | integrase arm-type DNA-binding domain-containing | |||