Escherichia coli RHB03-C04 |
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Putative Escherichia coli RHB03-C04 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,481,625 bp | CP058052 |
| plasmid pRHB03-C04_3: | 44,007 bp | CP058054 |
REBASE acronym: Eco3C04
Org_num: 44071
All begin HVV57_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5200 | GTPase family protein | |||
| 5205 | M | M.EcoNT1F25ORFBP (93% identity) | M.Eco3C04ORF5205P | |
| 5210 | S | S.Eco41C07ORF5215P (100% identity) | S.Eco3C04ORF5205P | |
| 5215 | R | Eco819ORF3430P (100% identity) | Eco3C04ORF5205P | |
| 5220 | transposase domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1655 | cell division protein DamX | |||
| 1660 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco3C04DamP |
| 1665 | ribulose-phosphate 3-epimerase | |||
| 2280 | DUF2556 family protein | |||
| 2285 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco3C04ORF2285P |
| 2290 | DNA-binding transcriptional regulator Fis | |||
| 8685 | phosphohydrolase | |||
| 8690 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco3C04DcmP |
| 8695 | V | V.SflSTLE1DcmP (100% identity) | V.Eco3C04DcmP | |
| 8700 | drug/metabolite exporter YedA | |||
| 18600 | HNH endonuclease | |||
| 18605 | R | SflSTLE4ORF19250P (48% identity) | Eco3C04ORF18605P | |
| 18610 | IS1 family transposase | |||
| plasmid pRHB03-C04_3 | ||||
| 21970 | IS1 family transposase | |||
| 21975 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.Eco3C04ORF21975P |
| 21980 | R | EcoPK6ORF23325BP (100% identity) | CCWGG | R1.Eco3C04ORF21975P |
| 21985 | IS1380-like element ISEc9 family transposase | |||