Capnocytophaga species oral taxon 902 W10638 |
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Putative Capnocytophaga species oral taxon 902 W10638 RM systems
Ref: Wade,W.G. et al. unpublished
REBASE ref # 31063
Complete sequence: 2,837,214 bp
GenBank #: CP058261
REBASE acronym: Csp10638
Org_num: 44044
All begin HW278_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6975 | aminoacyl-tRNA hydrolase | |||
| 6980 | R | Coc28121ORF6210P (99% identity) | GAYNNNNNNCTC | Csp10638IP |
| 6985 | S | S.Coc2191ORF2575P (62% identity) | GAYNNNNNNCTC | S.Csp10638I |
| 6990 | virulence RhuM family protein | |||
| 6995 | M | M.Coc28121ORF6210P (99% identity) | GAYNNNNNNCTC | M.Csp10638I |
| 7000 | 30S ribosomal protein S12 methylthiotransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4355 | GNAT family N-acetyltransferase | |||
| 4360 | M | M.Aba17537ORF895P (72% identity) | M.Csp10638ORF4360P | |
| 4365 | R | Aba17537ORF895P (66% identity) | Csp10638ORF4360P | |
| 4370 | dihydroorotase | |||
| 5250 | glycoside hydrolase family 130 protein | |||
| 5255 | R | CspD1176ORF6380P (98% identity) | GGNCC | Csp10638IIIP |
| 5260 | AIPR family protein | |||
| 5265 | M | M.Csp10654II (99% identity) | GGNCC | M.Csp10638III |
| 5270 | DegT/DnrJ/EryC1/StrS family aminotransferase | |||
| 5520 | 149 aa hypothetical protein | |||
| 5525 | R | Csp10654ORF3920P (100% identity) | GCNGC | Csp10638ORF5530P |
| 5530 | M | M.Csp10654ORF3920P (100% identity) | GCNGC | M.Csp10638ORF5530P |
| 5535 | peptidoglycan DD-metalloendopeptidase family | |||
| 6740 | methyltransferase | |||
| 6745 | M | M.Coc28121ORF6480P (100% identity) | GAATTC | M.Csp10638II |
| 6750 | R | Coc28121ORF6480P (100% identity) | GAATTC | Csp10638IIP |
| 6755 | DNA polymerase I | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4945 | peptidoglycan DD-metalloendopeptidase family | |||
| 4950 | R | Coc28121ORF7900P (96% identity) | GCTTA | Csp10638IVP |
| 4955 | M | M.Coc28121ORF7900P (100% identity) | GCTTA | M.Csp10638IV |
| 4960 | ribonuclease HII | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12095 | winged helix-turn-helix transcriptional | |||
| 12100 | R | Cla11458McrBP (93% identity) | Csp10638McrBP | |
| 12105 | R | Coc11546McrCP (98% identity) | Csp10638McrCP | |
| 12110 | class I SAM-dependent methyltransferase | |||