Vibrio spartinae 3.6 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Vibrio spartinae 3.6 RM systems
Ref: Vitale,G.A. et al. J. Nat. Prod. 83 (5), 1495-1504 (2020)
REBASE ref # 31059
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,817,659 bp | CP046268 |
| chromosome 2: | 1,192,351 bp | CP046269 |
REBASE acronym: Vsp36
Org_num: 44036
All begin Vspart_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3014 | 53 aa hypothetical protein | |||
| 3015 | R | Vsp9026ORFBP (96% identity) | Vsp36ORF3018P | |
| 3016 | S | S.Aba533ORF2645P (53% identity) | S.Vsp36ORF3018P | |
| 3017 | 42 aa hypothetical protein | |||
| 3018 | M | M.Vsp9026ORFBP (95% identity) | M.Vsp36ORF3018P | |
| 3019 | 133 aa hypothetical protein | |||
| 3375 | WLM domain protein | |||
| ??? | R | VpaHP1ORF265P (96% identity) | Vsp36ORF3384P | |
| 3378 | 364 aa hypothetical protein | |||
| 3379 | 57 aa hypothetical protein | |||
| 3380 | 202 aa hypothetical protein | |||
| 3381 | 425 aa hypothetical protein | |||
| 3382 | 77 aa hypothetical protein | |||
| 3383 | S | S.SxiBC01ORF77P (55% identity) | S.Vsp36ORF3384P | |
| 3384 | M | M.VspLQ2ORF18940P (86% identity) | M.Vsp36ORF3384P | |
| 3385 | Transposon Tn7 transposition protein TnsA | |||
| chromosome 2 | ||||
| 4322 | 222 aa hypothetical protein | |||
| 4323 | S | S.SspIC202ORF7985P (54% identity) | S.Vsp36ORF4324P | |
| 4324 | M | M.Vfl0221ORFBP (88% identity) | M.Vsp36ORF4324P | |
| 4325 | R | Vfl0221ORFBP (97% identity) | Vsp36ORF4324P | |
| 4326 | Quorum-sensing regulator protein F | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 130 | transcriptional regulator | |||
| 131 | M | M.PspS66ORF3125P (73% identity) | M.Vsp36ORF131P | |
| 132 | 524 aa hypothetical protein | |||
| 304 | cell division protein DamX | |||
| 305 | M | M.Vsp9026ORFDP (100% identity) | GATC | M.Vsp36DamP |
| 306 | Ribulose-phosphate 3-epimerase | |||
| 824 | nucleotidyltransferase | |||
| 825 | R | Vru4DptFP (96% identity) | Vsp36DptFP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptG | |||
| 825 | DNA phosphorothioation-dependent restriction | |||
| ??? | R | Vja31412DptGP (67% identity) | Vsp36DptGP | |
| 827 | DNA phosphorothioation-dependent restriction | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptG | |||
| 827 | R | Vru4DptHP (95% identity) | Vsp36DptHP | |
| 828 | 43 aa hypothetical protein | |||
| 831 | AIPR protein | |||
| 832 | M | M.Vru4DndEP (91% identity) | M.Vsp36DndEP | |
| 833 | chromosome segregation protein | |||
| 832 | DNA sulfur modification protein DndE | |||
| 833 | M | M.Vru4DndDP (97% identity) | M.Vsp36DndDP | |
| 834 | sulfurtransferase DndC | |||
| 833 | chromosome segregation protein | |||
| 834 | M | M.Vru4DndCP (97% identity) | M.Vsp36DndCP | |
| 835 | DNA sulfur modification protein DndB | |||
| 834 | sulfurtransferase DndC | |||
| 835 | M | M.Vru4DndBP (94% identity) | M.Vsp36DndBP | |
| 836 | DNA phosphorothioation-associated putative | |||
| 1094 | nucleotidyltransferase | |||
| 1095 | M | M.Vsp9026ORFFP (100% identity) | M.Vsp36ORF1095P | |
| 1096 | 243 aa hypothetical protein | |||