Ralstonia solanacearum YQ |
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Putative Ralstonia solanacearum YQ RM systems
Ref: Zhou,X. and Zhang,X. unpublished
REBASE ref # 31034
| Sequence length: | GenBank #: | |
| Chromosome: | 3,782,949 bp | CP059489 |
| plasmid unnamed: | 2,039,736 bp | CP059490 |
REBASE acronym: RsoYQ
Org_num: 43655
All begin H2F19_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 280 | Rrf2 family transcriptional regulator | |||
| 285 | M | M.RsoT78ORF205P (100% identity) | M.RsoYQORF285P | |
| 290 | 284 aa hypothetical protein | |||
| 295 | R | RsoT78ORF205P (88% identity) | RsoYQORF285P | |
| 300 | sensor histidine kinase N-terminal | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1160 | HNH endonuclease | |||
| 1165 | M | M.RsoT117ORF1270P (100% identity) | M1.RsoYQORF1165P | |
| 1170 | M | M2.RsoF1ORF1260P (100% identity) | M2.RsoYQORF1165P | |
| 1175 | 121 aa hypothetical protein | |||
| 1275 | type III secretion system YopJ family effector | |||
| 1280 | M | M.RsoYC40ORFBP (100% identity) | M.RsoYQORF1280P | |
| 1285 | phage tail tape measure protein | |||
| 2050 | Com family DNA-binding transcriptional | |||
| 2055 | M | M.RsoF1ORF2150P (100% identity) | M.RsoYQORF2055P | |
| 2065 | helix-turn-helix transcriptional regulator | |||
| 7510 | tryptophan synthase subunit beta | |||
| 7515 | M | M.Rsp647ORF10140P (100% identity) | GTWWAC | M.RsoYQORF7515P |
| 7520 | tryptophan synthase subunit alpha | |||
| 13160 | type II toxin-antitoxin system VapC family | |||
| 13165 | M | M.RsoF1ORF12915P (100% identity) | M.RsoYQORF13165P | |
| 13170 | 97 aa hypothetical protein | |||
| plasmid unnamed | ||||
| 24920 | type III secretion system effector protein | |||
| 24925 | M | M.RsoF1ORF20545P (100% identity) | M.RsoYQORF24925P | |
| 24930 | mannose-binding lectin protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 175 | bifunctional (p)ppGpp | |||
| 180 | R | RsoUW763MrrP (100% identity) | RsoYQMrrP | |
| 185 | O-acetylhomoserine | |||