Escherichia coli RHB03-C12 |
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Putative Escherichia coli RHB03-C12 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,662,184 bp | CP058031 |
| plasmid pRHB03-C12_2: | 120,225 bp | CP058032 |
REBASE acronym: Eco03C12
Org_num: 43625
All begin HVV62_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18965 | 128 aa hypothetical protein | |||
| 18970 | M | M.Eco41E2C05ORF19405P (100% identity) | M.Eco03C12ORF18970P | |
| 18975 | S | S.EcoSTEC640ORF20915P (100% identity) | S.Eco03C12ORF18970P | |
| 18980 | 433 aa hypothetical protein | |||
| plasmid pRHB03-C12_2 | ||||
| 22090 | IS3 family transposase | |||
| 22095 | R | SflSTLE3ORF22785P (100% identity) | Eco03C12ORF22110P | |
| 22100 | DUF4268 domain-containing protein | |||
| 22105 | S | S.SflFF64ORF5405P (100% identity) | S.Eco03C12ORF22110P | |
| 22110 | M | M.EcoLR46ORF46700P (100% identity) | M.Eco03C12ORF22110P | |
| 22115 | SPFH/Band 7/PHB domain protein | |||
| 22600 | IS5-like element ISKpn26 family transposase | |||
| 22605 | M | M.EcoTHO010ORF28970P (100% identity) | M.Eco03C12ORF22605P | |
| 22610 | S | S.Eco23ORF669P (70% identity) | S.Eco03C12ORF22605P | |
| 22615 | R | Eco1919D3ORF1435P (99% identity) | Eco03C12ORF22605P | |
| 22620 | 158 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1710 | cell division protein DamX | |||
| 1715 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco03C12DamP |
| 1720 | ribulose-phosphate 3-epimerase | |||
| 2265 | DUF2556 family protein | |||
| 2270 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco03C12ORF2270P |
| 2275 | DNA-binding transcriptional regulator Fis | |||
| 8780 | phosphohydrolase | |||
| 8785 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco03C12DcmP |
| 8790 | V | V.SflFF64DcmP (100% identity) | V.Eco03C12DcmP | |
| 8795 | drug/metabolite exporter YedA | |||
| 18945 | HNH endonuclease | |||
| 18950 | R | EcosB2CORFAP (100% identity) | Eco03C12ORF18950P | |
| 18955 | AAA family ATPase | |||
| plasmid pRHB03-C12_2 | ||||
| 22655 | 76 aa hypothetical protein | |||
| 22660 | M | M.SphSSU5ORF88P (96% identity) | M.Eco03C12ORF22660P | |
| 22665 | 290 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18950 | HNH endonuclease | |||
| 18955 | R | SflN101McrBP (100% identity) | Eco03C12McrBP | |
| 18960 | R | EcoSO63McrCP (100% identity) | Eco03C12McrCP | |
| 18965 | 128 aa hypothetical protein | |||