Escherichia coli RHB15-C19 |
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Putative Escherichia coli RHB15-C19 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,100,561 bp | CP055958 |
| plasmid pRHB15-C19_2: | 191,948 bp | CP055959 |
| plasmid pRHB15-C19_3: | 68,920 bp | CP055960 |
REBASE acronym: Eco15C19
Org_num: 43632
All begin HVX08_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3755 | 428 aa hypothetical protein | |||
| 3760 | S | S.EcosC41ORF5210P (100% identity) | GCAGNNNNNTGT | S.Eco15C19ORF3765P |
| 3765 | M | M.EcosC41ORF5210P (100% identity) | GCAGNNNNNTGT | M.Eco15C19ORF3765P |
| 3770 | 128 aa hypothetical protein | |||
| plasmid pRHB15-C19_2 | ||||
| 25750 | 62 aa hypothetical protein | |||
| 25755 | R | Eco15C23ORF25755P (100% identity) | Eco15C19ORF25760P | |
| 25760 | M | M.SenS1545ORF24780P (100% identity) | M.Eco15C19ORF25760P | |
| 25765 | chromosome segregation protein SMC | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3780 | AAA family ATPase | |||
| 3785 | R | SflN101ORF11875P (100% identity) | Eco15C19ORF3785P | |
| 3790 | HNH endonuclease | |||
| 8690 | TraR/DksA family transcriptional regulator | |||
| 8695 | M | M.EfeC18ORF7705P (100% identity) | M.Eco15C19ORF8695P | |
| 8700 | 273 aa hypothetical protein | |||
| 10635 | TrmB family transcriptional regulator | |||
| 10640 | M | M.Eco15C23ORF1425P (100% identity) | M.Eco15C19ORF10640P | |
| 10645 | tellurite resistance TerB family protein | |||
| 15420 | drug/metabolite exporter YedA | |||
| 15425 | V | V.SsoSE61DcmP (100% identity) | V.Eco15C19DcmP | |
| 15430 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco15C19DcmP |
| 15435 | phosphohydrolase | |||
| 22415 | DNA-binding transcriptional regulator Fis | |||
| 22420 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco15C19ORF22420P |
| 22425 | DUF2556 family protein | |||
| 22970 | ribulose-phosphate 3-epimerase | |||
| 22975 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco15C19DamP |
| 22980 | cell division protein DamX | |||
| plasmid pRHB15-C19_2 | ||||
| 25410 | 101 aa hypothetical protein | |||
| 25415 | M | M.Eco15C23ORF25410P (100% identity) | M.Eco15C19ORF25415P | |
| 25420 | 73 aa hypothetical protein | |||
| plasmid pRHB15-C19_3 | ||||
| 25845 | 103 aa hypothetical protein | |||
| 25850 | M | M.Kpn1026ORFJP (100% identity) | M.Eco15C19ORF25850P | |
| 25855 | DUF1380 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3770 | 128 aa hypothetical protein | |||
| 3775 | R | Ecows53McrCP (100% identity) | Eco15C19McrCP | |
| 3780 | R | EcoSMBLMcrBP (100% identity) | Eco15C19McrBP | |
| 3785 | HNH endonuclease | |||