Escherichia coli RHBSTW-00093 |
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Putative Escherichia coli RHBSTW-00093 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,905,832 bp | CP055934 |
| plasmid pRHBSTW-00093_2: | 298,065 bp | CP055935 |
| plasmid pRHBSTW-00093_3: | 150,496 bp | CP055936 |
REBASE acronym: Eco0093
Org_num: 43636
All begin HV065_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5110 | DUF2441 domain-containing protein | |||
| 5115 | M | M.Kpn569ORF24840P (100% identity) | M.Eco0093ORF5115P | |
| 5120 | 177 aa hypothetical protein | |||
| 8795 | drug/metabolite exporter YedA | |||
| 8800 | V | V.SsoST152DcmP (100% identity) | V.Eco0093DcmP | |
| 8805 | M | M.Spn7978DcmP (100% identity) | CCWGG | M.Eco0093DcmP |
| 8810 | phosphohydrolase | |||
| 15605 | tyrosine-type recombinase/integrase | |||
| 15610 | M | M.EcoPO3ORF2605P (100% identity) | ATGCAT | M.Eco0093ORF15610P |
| 15615 | DUF2556 family protein | |||
| 16240 | ribulose-phosphate 3-epimerase | |||
| 16245 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco0093DamP |
| 16250 | cell division protein DamX | |||
| 20025 | 8-oxoguanine DNA glycosylase | |||
| 20030 | M | M.Kva353ORF26235P (100% identity) | M.Eco0093ORF20030P | |
| 20035 | dGTPase | |||
| 23430 | SIR2 family protein | |||
| 23435 | R | Ecos81ORF18545P (100% identity) | YGGCCR | Eco0093ORF23440P |
| 23440 | M | M.PanLORF19300P (100% identity) | YGGCCR | M.Eco0093ORF23440P |
| 23445 | IS3 family transposase | |||
| plasmid pRHBSTW-00093_2 | ||||
| 24725 | 47 aa hypothetical protein | |||
| 24730 | M | M.StypAKU1ORFCP (68% identity) | M.Eco0093ORF24740BP | |
| 24735 | IS3 family transposase | |||
| 24740 | M | M.StypAKU1ORFCP (31% identity) | M.Eco0093ORF24740AP | |
| 24745 | thermonuclease family protein | |||
| 25235 | DNA-binding protein | |||
| 25240 | M | M.Ype21801ORF197P (100% identity) | M.Eco0093ORF25240P | |
| 25245 | 273 aa hypothetical protein | |||
| plasmid pRHBSTW-00093_3 | ||||
| 26090 | 73 aa hypothetical protein | |||
| 26095 | M | M.SmaBWH35ORF25885P (100% identity) | M.Eco0093ORF26095P | |
| 26100 | 76 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8965 | SpnT protein | |||
| 8970 | M | M.Kox365ORF9950P (9% identity) | M.Eco0093ORF8970AP | |
| 8975 | IS1 family transposase | |||
| 8980 | M | M.Cfr13639IV (90% identity) | M.Eco0093ORF8970BP | |
| 8985 | R | Cfr13639IVP (97% identity) | Eco0093ORF8970P | |
| 8990 | shufflon system plasmid conjugative transfer | |||