Ref: Shaw,L.P. unpublished

REBASE ref # 28537

Sequence length:GenBank #:
Chromosome: 4,869,469 bp CP055906
plasmid pRHBSTW-00880_2: 315,903 bp CP055907
plasmid pRHBSTW-00880_3: 109,959 bp CP055908

REBASE acronym: Cfr880

Org_num: 43425

 

All begin HV310_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
23185 IS5 family transposase
23190 M M.Cfr116I (100% identity) GATGNNNNNGTT M.Cfr880ORF23190P
23195 S S.Csp229ORF14645P (95% identity) GATGNNNNNGTT S.Cfr880ORF23190P
23200 YecA family protein
23205 R EcoCP61ORF17550P (99% identity) GATGNNNNNGTT Cfr880ORF23190P
23210 M48 family metallopeptidase
 
plasmid pRHBSTW-00880_2
 
25015 156 aa hypothetical protein
25020 M M.LadZ961ORF22445P (100% identity) M.Cfr880ORF25020P
25025 S S.LadZ961ORF22445P (100% identity) S.Cfr880ORF25020P
25030 R LadZ961ORF22445P (100% identity) Cfr880ORF25020P
25035 ISL3 family transposase
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
4150 DinI family protein
4155 M M.SflFF80ORF13025P (97% identity) M.Cfr880ORF4155P
4160 85 aa hypothetical protein
 
5105 139 aa hypothetical protein
5110 M M.Cfr589ORF7720P (95% identity) M.Cfr880ORF5110P
5115 R Cfr589ORF7720P (94% identity) Cfr880ORF5110P
5120 replication endonuclease
 
7290 232 aa hypothetical protein
7295 M M.Cbr1421ORF4880P (97% identity) M.Cfr880ORF7295P
7300 58 aa hypothetical protein
 
11230 DNA-binding transcriptional regulator Fis
11235 M M.Cfr923ORF2155P (100% identity) M.Cfr880ORF11235P
11240 DUF2556 family protein
 
11790 ribulose-phosphate 3-epimerase
11795 M M.Eco9094DamP (100% identity) GATC M.Cfr880DamP
11800 cell division protein DamX
 
12290 401 aa hypothetical protein
12295 M M.Esp07ORF2056P (100% identity) M.Cfr880ORF12295P
12300 holin
 
22585 phosphohydrolase
22590 M M.Cfr408ORF13785P (100% identity) M.Cfr880ORF22590P
22595 V V.Cfr31C16ORF13625P (100% identity) V.Cfr880ORF22590P
22600 drug/metabolite exporter YedA
 
22885 3-5 exoribonuclease
22890 M M.Cfr691ORFUP (75% identity) M.Cfr880ORF22890P
22895 68 aa hypothetical protein
 
22900 57 aa hypothetical protein
22905 M M.Cfr691ORFTP (100% identity) M.Cfr880ORF22905P
22910 replication endonuclease
 
22915 71 aa hypothetical protein
22920 M M.Ero695ORF8645P (98% identity) M.Cfr880ORF22920P
22925 phage portal protein
 
plasmid pRHBSTW-00880_2
 
23790 76 aa hypothetical protein
23795 M M.Sen3039ORF24445P (100% identity) M.Cfr880ORF23795P
23800 DNA polymerase III subunit beta
 
plasmid pRHBSTW-00880_3
 
25790 73 aa hypothetical protein
25795 M M.EspSST3ORF2945P (100% identity) M.Cfr880ORF25795P
25800 155 aa hypothetical protein