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Putative Citrobacter freundii RHBSTW-00880 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Sequence length: | GenBank #: | |
Chromosome: | 4,869,469 bp | CP055906 |
plasmid pRHBSTW-00880_2: | 315,903 bp | CP055907 |
plasmid pRHBSTW-00880_3: | 109,959 bp | CP055908 |
REBASE acronym: Cfr880
Org_num: 43425
All begin HV310_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
23185 | IS5 family transposase | |||
23190 | M | M.CfrF3221ORF11240P (100% identity) | GATGNNNNNGTT | M.Cfr880ORF23190P |
23195 | S | S.KpnKLZTORF27160P (95% identity) | GATGNNNNNGTT | S.Cfr880ORF23190P |
23200 | YecA family protein | |||
23205 | R | EcoCP61ORF17550P (99% identity) | GATGNNNNNGTT | Cfr880ORF23190P |
23210 | M48 family metallopeptidase | |||
plasmid pRHBSTW-00880_2 | ||||
25015 | 156 aa hypothetical protein | |||
25020 | M | M.LadZ961ORF22445P (100% identity) | M.Cfr880ORF25020P | |
25025 | S | S.LadZ961ORF22445P (100% identity) | S.Cfr880ORF25020P | |
25030 | R | LadZ961ORF22445P (100% identity) | Cfr880ORF25020P | |
25035 | ISL3 family transposase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4150 | DinI family protein | |||
4155 | M | M.SflFF80ORF13025P (97% identity) | M.Cfr880ORF4155P | |
4160 | 85 aa hypothetical protein | |||
5105 | 139 aa hypothetical protein | |||
5110 | M | M.Cfr589ORF7720P (95% identity) | M.Cfr880ORF5110P | |
5115 | R | Cfr589ORF7720P (94% identity) | Cfr880ORF5110P | |
5120 | replication endonuclease | |||
7290 | 232 aa hypothetical protein | |||
7295 | M | M.Cbr1421ORF4880P (97% identity) | M.Cfr880ORF7295P | |
7300 | 58 aa hypothetical protein | |||
11230 | DNA-binding transcriptional regulator Fis | |||
11235 | M | M.Cfr923ORF2155P (100% identity) | M.Cfr880ORF11235P | |
11240 | DUF2556 family protein | |||
11790 | ribulose-phosphate 3-epimerase | |||
11795 | M | M.Eco9094DamP (100% identity) | GATC | M.Cfr880DamP |
11800 | cell division protein DamX | |||
12290 | 401 aa hypothetical protein | |||
12295 | M | M.KorFY07ORF17830P (100% identity) | M.Cfr880ORF12295P | |
12300 | holin | |||
22585 | phosphohydrolase | |||
22590 | M | M.Cfr408ORF13785P (100% identity) | M.Cfr880ORF22590P | |
22595 | V | V.Cfr31C16ORF13625P (100% identity) | V.Cfr880ORF22590P | |
22600 | drug/metabolite exporter YedA | |||
22885 | 3-5 exoribonuclease | |||
22890 | M | M.Cfr691ORFUP (75% identity) | M.Cfr880ORF22890P | |
22895 | 68 aa hypothetical protein | |||
22900 | 57 aa hypothetical protein | |||
22905 | M | M.Cfr691ORFTP (100% identity) | M.Cfr880ORF22905P | |
22910 | replication endonuclease | |||
22915 | 71 aa hypothetical protein | |||
22920 | M | M.Ero695ORF8645P (98% identity) | M.Cfr880ORF22920P | |
22925 | phage portal protein | |||
plasmid pRHBSTW-00880_2 | ||||
23790 | 76 aa hypothetical protein | |||
23795 | M | M.Sen3039ORF24445P (100% identity) | M.Cfr880ORF23795P | |
23800 | DNA polymerase III subunit beta | |||
plasmid pRHBSTW-00880_3 | ||||
25790 | 73 aa hypothetical protein | |||
25795 | M | M.EspSST3ORF2945P (100% identity) | M.Cfr880ORF25795P | |
25800 | 155 aa hypothetical protein |