Escherichia coli RHB07-C04 |
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Putative Escherichia coli RHB07-C04 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,172,297 bp | CP057975 |
| plasmid pRHB07-C04_2: | 93,585 bp | CP057976 |
| plasmid pRHB07-C04_3: | 90,123 bp | CP057977 |
REBASE acronym: Eco07C04
Org_num: 43441
All begin HVW04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1080 | IS3 family transposase | |||
| 1085 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.Eco07C04ORF1085P |
| 1090 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.Eco07C04ORF1085P |
| 1095 | YecA family protein | |||
| 1100 | cold shock domain-containing protein | |||
| 1105 | R | Ecoppa2ORF22455P (100% identity) | GATGNNNNNNTAC | Eco07C04ORF1085P |
| 1110 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 825 | phosphohydrolase | |||
| 830 | M | M.Ecoppa2DcmP (100% identity) | CCWGG | M.Eco07C04DcmP |
| 835 | V | V.Ecoppa2DcmP (100% identity) | V.Eco07C04DcmP | |
| 840 | drug/metabolite exporter YedA | |||
| 11600 | RM | EcoZ30ORF19095P (100% identity) | Eco07C04ORF11600P | |
| 11605 | DEAD/DEAH box helicase | |||
| 11640 | HNH endonuclease | |||
| 11645 | R | Ecoppa2ORF12035P (100% identity) | Eco07C04ORF11645P | |
| 11650 | 332 aa hypothetical protein | |||
| 17195 | cell division protein DamX | |||
| 17200 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco07C04DamP |
| 17205 | ribulose-phosphate 3-epimerase | |||
| 17725 | DUF2556 family protein | |||
| 17730 | M | M.Ecos142ORF2405P (100% identity) | ATGCAT | M.Eco07C04ORF17730P |
| 17735 | DNA-binding transcriptional regulator Fis | |||
| plasmid pRHB07-C04_2 | ||||
| 24810 | recombination-associated protein RdgC | |||
| 24815 | M | M.Eco16502ORF5023P (99% identity) | M.Eco07C04ORF24815P | |
| 24830 | tellurite resistance TerB family protein | |||
| plasmid pRHB07-C04_3 | ||||
| 25220 | 102 aa hypothetical protein | |||
| 25225 | M | M.Sso866ORF27155P (100% identity) | M.Eco07C04ORF25225P | |
| 25230 | 73 aa hypothetical protein | |||