Escherichia coli RHB10-C05 |
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Putative Escherichia coli RHB10-C05 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,138,147 bp | CP057916 |
| plasmid pRHB10-C05_2: | 99,864 bp | CP057917 |
REBASE acronym: Eco10C05
Org_num: 43460
All begin HVW39_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2450 | endoribonuclease SymE | |||
| ??? | S | S.Eco42C22ORF11485P (100% identity) | S.Eco10C05ORF2460P | |
| 2460 | M | M.Eco42C22ORF11485P (100% identity) | M.Eco10C05ORF2460P | |
| 2465 | R | Eco42C22ORF11485P (100% identity) | Eco10C05ORF2460P | |
| 2470 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2100 | BREX system P-loop protein BrxC | |||
| 2105 | RM | Eco24C04ORF2100P (100% identity) | Eco10C05ORF2105P | |
| 2110 | BREX-1 system phosphatase PglZ type A | |||
| 2235 | 678 aa hypothetical protein | |||
| 2240 | R | Ecoi362ORF3874P (100% identity) | Eco10C05ORF2240P | |
| 2245 | HNH endonuclease | |||
| 2655 | PerC family transcriptional regulator | |||
| 2660 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco10C05ORF2660P |
| 2665 | LexA family transcriptional regulator | |||
| 8135 | TrmB family transcriptional regulator | |||
| 8140 | M | M.EcoC9964ORF1930P (100% identity) | M.Eco10C05ORF8140P | |
| 8145 | 92 aa hypothetical protein | |||
| 9885 | TrmB family transcriptional regulator | |||
| 9890 | M | M.Eco24C04ORF9875P (100% identity) | M.Eco10C05ORF9890P | |
| 9900 | holin | |||
| 13575 | drug/metabolite exporter YedA | |||
| 13580 | V | V.SsoSE61DcmP (100% identity) | V.Eco10C05DcmP | |
| 13585 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco10C05DcmP |
| 13590 | phosphohydrolase | |||
| 17440 | 121 aa hypothetical protein | |||
| 17445 | R | Sso8033ORF3755P (100% identity) | Eco10C05ORF17450P | |
| 17450 | M | M.Eco24C04ORF17435P (100% identity) | M.Eco10C05ORF17450P | |
| 17455 | 257 aa hypothetical protein | |||
| 17615 | phage holin, lambda family | |||
| 17620 | M | M.Eco24C04ORF17605P (100% identity) | M.Eco10C05ORF17620P | |
| 17625 | TrmB family transcriptional regulator | |||
| 17655 | LexA family transcriptional regulator | |||
| 17660 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.Eco10C05ORF17660P |
| 17665 | PerC family transcriptional regulator | |||
| 21300 | DNA-binding transcriptional regulator Fis | |||
| 21305 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco10C05ORF21305P |
| 21310 | DUF2556 family protein | |||
| 21855 | ribulose-phosphate 3-epimerase | |||
| 21860 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco10C05DamP |
| 21865 | cell division protein DamX | |||
| plasmid pRHB10-C05_2 | ||||
| 25075 | 73 aa hypothetical protein | |||
| 25080 | M | M.EcoWY5172ORF23370P (100% identity) | M.Eco10C05ORF25080P | |
| 25085 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2440 | R | Eco42C22McrCP (100% identity) | Eco10C05McrCP | |
| 2445 | R | Eco42C22McrBP (100% identity) | Eco10C05McrBP | |
| 2450 | endoribonuclease SymE | |||
| 2465 | type I restriction-modification system | |||
| 2470 | R | Ssp28760MrrP (100% identity) | Eco10C05MrrP | |
| 2475 | GTPase | |||