Escherichia coli RHB13-C08 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RHB13-C08 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,817,954 bp | CP057839 |
| plasmid pRHB13-C08_2: | 104,712 bp | CP057840 |
REBASE acronym: Eco13C08
Org_num: 43341
All begin HVW78_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19335 | restriction endonuclease | |||
| 19340 | M | M.Eco13C06ORF19340P (100% identity) | M.Eco13C08ORF19340P | |
| 19345 | S | S.EcoGF33ORF19005P (100% identity) | S.Eco13C08ORF19340P | |
| 19350 | R | Eco13C06ORF19340P (100% identity) | Eco13C08ORF19340P | |
| 19355 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1830 | cell division protein DamX | |||
| 1835 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco13C08DamP |
| 1840 | ribulose-phosphate 3-epimerase | |||
| 2360 | DUF2556 family protein | |||
| 2365 | M | M.SdyFF51ORF20390P (100% identity) | ATGCAT | M.Eco13C08ORF2365P |
| 2370 | DNA-binding transcriptional regulator Fis | |||
| 8945 | phosphohydrolase | |||
| 8950 | M | M.EcoWECDcmP (100% identity) | CCWGG | M.Eco13C08DcmP |
| 8955 | V | V.SsoSE61DcmP (100% identity) | V.Eco13C08DcmP | |
| 8960 | drug/metabolite exporter YedA | |||
| 19555 | RM | EcoL26ORF21410P (100% identity) | GAAABCC | Eco13C08ORF19555P |
| 19560 | DEAD/DEAH box helicase | |||
| 19590 | N-acetylneuraminic acid mutarotase | |||
| 19595 | R | EcoRG065ORF11765P (100% identity) | Eco13C08ORF19595P | |
| 19600 | 59 aa hypothetical protein | |||
| plasmid pRHB13-C08_2 | ||||
| 23030 | 73 aa hypothetical protein | |||
| 23035 | M | M.SflN92ORF24820P (100% identity) | M.Eco13C08ORF23035P | |
| 23040 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17680 | restriction endonuclease | |||
| 17685 | R | EcoAH65GmrSDP (100% identity) | Eco13C08GmrSDP | |
| 17690 | recombinase family protein | |||