Escherichia coli RHB15-C23 |
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Putative Escherichia coli RHB15-C23 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,102,384 bp | CP057767 |
| plasmid pRHB15-C23_2: | 191,947 bp | CP057768 |
| plasmid pRHB15-C23_3: | 68,932 bp | CP057769 |
REBASE acronym: Eco15C23
Org_num: 43357
All begin HVX10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19280 | 428 aa hypothetical protein | |||
| 19285 | S | S.EcosC41ORF5210P (100% identity) | GCAGNNNNNTGT | S.Eco15C23ORF19290P |
| 19290 | M | M.EcosC41ORF5210P (100% identity) | GCAGNNNNNTGT | M.Eco15C23ORF19290P |
| 19295 | 128 aa hypothetical protein | |||
| plasmid pRHB15-C23_2 | ||||
| 25745 | 62 aa hypothetical protein | |||
| 25750 | R | Eco15C19ORF25760P (100% identity) | Eco15C23ORF25755P | |
| 25755 | M | M.SenS1545ORF24780P (100% identity) | M.Eco15C23ORF25755P | |
| 25760 | chromosome segregation protein SMC | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1420 | TrmB family transcriptional regulator | |||
| 1425 | M | M.Eco15C19ORF10640P (100% identity) | M.Eco15C23ORF1425P | |
| 1430 | tellurite resistance TerB family protein | |||
| 6200 | drug/metabolite exporter YedA | |||
| 6205 | V | V.SsoSE61DcmP (100% identity) | V.Eco15C23DcmP | |
| 6210 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco15C23DcmP |
| 6215 | phosphohydrolase | |||
| 13195 | DNA-binding transcriptional regulator Fis | |||
| 13200 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco15C23ORF13200P |
| 13205 | DUF2556 family protein | |||
| 13750 | ribulose-phosphate 3-epimerase | |||
| 13755 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco15C23DamP |
| 13760 | cell division protein DamX | |||
| 19305 | AAA family ATPase | |||
| 19310 | R | SflN101ORF11875P (100% identity) | Eco15C23ORF19310P | |
| 19315 | HNH endonuclease | |||
| 24215 | TraR/DksA family transcriptional regulator | |||
| 24220 | M | M.EfeC18ORF7705P (100% identity) | M.Eco15C23ORF24220P | |
| 24225 | 273 aa hypothetical protein | |||
| plasmid pRHB15-C23_2 | ||||
| 25405 | 101 aa hypothetical protein | |||
| 25410 | M | M.Eco15C19ORF25415P (100% identity) | M.Eco15C23ORF25410P | |
| 25415 | 73 aa hypothetical protein | |||
| plasmid pRHB15-C23_3 | ||||
| 25840 | 103 aa hypothetical protein | |||
| 25845 | M | M.Kpn1026ORFJP (100% identity) | M.Eco15C23ORF25845P | |
| 25850 | DUF1380 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19295 | 128 aa hypothetical protein | |||
| 19300 | R | Ecows53McrCP (100% identity) | Eco15C23McrCP | |
| 19305 | R | EcoSMBLMcrBP (100% identity) | Eco15C23McrBP | |
| 19310 | HNH endonuclease | |||