Escherichia coli RHB17-C12 |
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Putative Escherichia coli RHB17-C12 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,304,582 bp | CP057690 |
| plasmid pRHB17-C12_2: | 99,352 bp | CP057691 |
REBASE acronym: Eco17C12
Org_num: 43369
All begin HVX30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2065 | toll/interleukin-1 receptor domain-containing | |||
| 2070 | M | M1.SspPIBORF19375P (100% identity) | M1.Eco17C12ORF2070P | |
| 2075 | M | M2.EcoU105ORFFP (100% identity) | M2.Eco17C12ORF2070P | |
| 2080 | S | S.SspPIBORF19375P (100% identity) | S.Eco17C12ORF2070P | |
| 2085 | R | EcoTCM3e1ORF20315P (99% identity) | Eco17C12ORF2070P | |
| 2090 | N-6 DNA methylase | |||
| 2350 | 237 aa hypothetical protein | |||
| 2355 | R | EcoP881ORF10770P (98% identity) | Eco17C12ORF2365P | |
| 2360 | S | S.Cam166ORF5055P (79% identity) | S.Eco17C12ORF2365P | |
| 2365 | M | M.Eco0187ORF19040P (98% identity) | M.Eco17C12ORF2365P | |
| 2370 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15 | DUF3850 domain-containing protein | |||
| 20 | M | M.EcoW03ORF11610P (99% identity) | M.Eco17C12ORF20P | |
| 25 | R | Eco29C05ORF20P (99% identity) | Eco17C12ORF20P | |
| 30 | DUF262 domain-containing protein | |||
| 2640 | PerC family transcriptional regulator | |||
| 2645 | M | M.Ecosa15ORFHP (100% identity) | GATC | M.Eco17C12ORF2645P |
| 2650 | LexA family transcriptional regulator | |||
| 4645 | NinE family protein | |||
| 4650 | M | M.EcoOS142ORF7470P (100% identity) | M.Eco17C12ORF4650P | |
| 4655 | protein ninF | |||
| 7395 | recombination protein NinB | |||
| 7400 | M | M.Eco70218ORF23095P (98% identity) | GATC | M.Eco17C12ORF7400P |
| 7405 | NinE family protein | |||
| 8820 | NinE family protein | |||
| 8825 | M | M.EcoOS142ORF7470P (100% identity) | M.Eco17C12ORF8825P | |
| 8830 | protein ninF | |||
| 14145 | drug/metabolite exporter YedA | |||
| 14150 | V | V.Ecostr9DcmP (74% identity) | V.Eco17C12DcmP | |
| 14155 | M | M.Eco9702DcmP (100% identity) | CCWGG | M.Eco17C12DcmP |
| 14160 | phosphohydrolase | |||
| 14930 | phage portal protein | |||
| 14935 | R | EcoCase5ORF15P (99% identity) | Eco17C12ORF14945P | |
| 14940 | 330 aa hypothetical protein | |||
| 14945 | M | M.EcoCase5ORF15P (99% identity) | M.Eco17C12ORF14945P | |
| 14950 | replication endonuclease | |||
| 21445 | DNA-binding transcriptional regulator Fis | |||
| ??? | M | M.EcoTHO008ORF4610P (99% identity) | ATGCAT | M.Eco17C12ORF21450P |
| 21455 | DUF2556 family protein | |||
| 22000 | ribulose-phosphate 3-epimerase | |||
| 22005 | M | M.Fnu048ORFTP (100% identity) | GATC | M.Eco17C12DamP |
| 22010 | cell division protein DamX | |||
| 23260 | DUF1804 family protein | |||
| 23265 | M | M.Eco3200ORF2936P (100% identity) | M.Eco17C12ORF23265P | |
| 23270 | phage terminase large subunit | |||
| plasmid pRHB17-C12_2 | ||||
| 26090 | 73 aa hypothetical protein | |||
| 26095 | M | M.SdyFF51ORF24515P (100% identity) | M.Eco17C12ORF26095P | |
| 26100 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2365 | SAM-dependent DNA methyltransferase | |||
| 2370 | R | Eco015GmrSDP (99% identity) | Eco17C12GmrSDP | |
| 2375 | cell filamentation protein Fic | |||