Escherichia coli RHB17-C14 |
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Putative Escherichia coli RHB17-C14 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,258,370 bp | CP057688 |
| plasmid pRHB17-C14_2: | 99,307 bp | CP057689 |
REBASE acronym: Eco17C14
Org_num: 43370
All begin HVX31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17595 | restriction endonuclease | |||
| 17600 | M | M.Eco34C24ORF18310P (100% identity) | GTAANNNNNCTT | M.Eco17C14ORF17600P |
| 17605 | S | S.Eco34C24ORF18310P (100% identity) | GTAANNNNNCTT | S.Eco17C14ORF17600P |
| 17610 | R | Eco34C24ORF18310P (100% identity) | GTAANNNNNCTT | Eco17C14ORF17600P |
| 17615 | endoribonuclease SymE | |||
| plasmid pRHB17-C14_2 | ||||
| 20565 | type II toxin-antitoxin system Phd/YefM family | |||
| 20570 | M | M.EcoprrI (99% identity) | M.Eco17C14ORF20570P | |
| 20575 | S | S.EcoprrI (92% identity) | S.Eco17C14ORF20570P | |
| 20580 | anticodon nuclease | |||
| 20585 | R | Eco12C02ORF23545P (100% identity) | Eco17C14ORF20570P | |
| 20590 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1630 | cell division protein DamX | |||
| 1635 | M | M.Eco34C24DamP (100% identity) | GATC | M.Eco17C14DamP |
| 1640 | ribulose-phosphate 3-epimerase | |||
| 2160 | DUF2556 family protein | |||
| 2165 | M | M.Eco34C24ORF2250P (100% identity) | M.Eco17C14ORF2165P | |
| 2170 | DNA-binding transcriptional regulator Fis | |||
| 8195 | phosphohydrolase | |||
| 8200 | M | M.Eco34C24DcmP (100% identity) | CCWGG | M.Eco17C14DcmP |
| 8205 | V | V.Eco34C24DcmP (100% identity) | V.Eco17C14DcmP | |
| 8210 | drug/metabolite exporter YedA | |||
| 11670 | 278 aa hypothetical protein | |||
| 11675 | M | M.Eco34C24ORF12100P (100% identity) | M.Eco17C14ORF11675P | |
| 11680 | YcgN family cysteine cluster protein | |||
| 13170 | replication endonuclease | |||
| 13175 | M | M.Sen663ORF16605P (73% identity) | M.Eco17C14ORF13175P | |
| 13180 | TraR/DksA family transcriptional regulator | |||
| 15710 | DUF1317 family protein | |||
| 15715 | M | M.EcoRG065ORF8075P (100% identity) | M.Eco17C14ORF15715P | |
| 15720 | cell division protein ZapA | |||
| plasmid pRHB17-C14_2 | ||||
| 20685 | tellurite resistance TerB family protein | |||
| 20690 | M | M.Eco655RtORF24550P (99% identity) | M.Eco17C14ORF20690P | |
| 20695 | recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17615 | endoribonuclease SymE | |||
| 17620 | R | Eco34C24GmrSDP (100% identity) | Eco17C14GmrSDP | |
| 17625 | DUF1127 domain-containing protein | |||