Escherichia coli RHB17-C17 |
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Putative Escherichia coli RHB17-C17 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 4,574,293 bp
GenBank #: CP057686
REBASE acronym: Eco17C17
Org_num: 43371
All begin HVX32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2880 | endoribonuclease SymE | |||
| 2885 | S | S.Eco13SOC06ORF3185P (100% identity) | S.Eco17C17ORF2890P | |
| 2890 | M | M.Ema777ORF2985P (100% identity) | M.Eco17C17ORF2890P | |
| 2895 | R | Eco13SOC06ORF3185P (100% identity) | Eco17C17ORF2890P | |
| 2900 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1995 | DEAD/DEAH box helicase | |||
| 2000 | RM | Eco3C16ORF3775P (100% identity) | Eco17C17ORF2000P | |
| 2760 | DUF4102 domain-containing protein | |||
| 2765 | R | Eco13SOC06DptFP (100% identity) | Eco17C17DptFP | |
| 2770 | DNA phosphorothioation-dependent restriction | |||
| 2765 | DNA phosphorothioation-dependent restriction | |||
| 2770 | R | Eco13SOC06DptGP (98% identity) | Eco17C17DptGP | |
| 2775 | IS5-like element ISKpn26 family transposase | |||
| 12280 | drug/metabolite exporter YedA | |||
| 12285 | V | V.Eco13SOC06DcmP (100% identity) | V.Eco17C17DcmP | |
| 12290 | M | M.Eco34C21DcmP (100% identity) | CCWGG | M.Eco17C17DcmP |
| 12295 | phosphohydrolase | |||
| 12670 | NinE family protein | |||
| 12675 | M | M.EcoPSJ36ORF17280P (100% identity) | GATC | M.Eco17C17ORF12675P |
| 12680 | recombination protein NinB | |||
| 18845 | DNA-binding transcriptional regulator Fis | |||
| 18850 | M | M.Eco13SOC06ORF19380P (100% identity) | ATGCAT | M.Eco17C17ORF18850P |
| 18855 | DUF2556 family protein | |||
| 19375 | ribulose-phosphate 3-epimerase | |||
| 19380 | M | M.Esp4742DamP (100% identity) | GATC | M.Eco17C17DamP |
| 19385 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2865 | IS1 family transposase | |||
| 2870 | R | Eco34C24GmrSDP (33% identity) | Eco17C17GmrSP | |
| 2875 | R | Eco13SOC06GmrSDP (59% identity) | Eco17C17GmrDP | |
| 2880 | endoribonuclease SymE | |||