Escherichia coli RHB24-C19 |
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Putative Escherichia coli RHB24-C19 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,883,401 bp | CP057487 |
| plasmid pRHB24-C19_2: | 146,285 bp | CP057488 |
REBASE acronym: Eco24C19
Org_num: 43069
All begin HVY14_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11945 | DUF4942 domain-containing protein | |||
| 11950 | M | M.EcotcmA3ORF9805P (100% identity) | M.Eco24C19ORF11950P | |
| 11955 | S | S.Eco380102ORF11120P (99% identity) | S.Eco24C19ORF11950P | |
| 11960 | R | SdyFF10ORF20075P (100% identity) | Eco24C19ORF11950P | |
| 11970 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1215 | phosphohydrolase | |||
| 1220 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco24C19DcmP |
| 1225 | V | V.SsoSE61DcmP (100% identity) | V.Eco24C19DcmP | |
| 1230 | drug/metabolite exporter YedA | |||
| 11920 | HNH endonuclease | |||
| 11925 | R | SdyFF10ORF20055P (100% identity) | Eco24C19ORF11925P | |
| 11930 | McrC family protein | |||
| 13195 | holin | |||
| 13205 | M | M.Eco04C06ORF13330P (100% identity) | M.Eco24C19ORF13205P | |
| 13210 | 67 aa hypothetical protein | |||
| 13245 | LexA family transcriptional regulator | |||
| 13250 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.Eco24C19ORF13250P |
| 13255 | PerC family transcriptional regulator | |||
| 16880 | cell division protein DamX | |||
| 16885 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco24C19DamP |
| 16890 | ribulose-phosphate 3-epimerase | |||
| 17410 | DUF2556 family protein | |||
| 17415 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco24C19ORF17415P |
| 17420 | DNA-binding transcriptional regulator Fis | |||
| 19075 | AAA family ATPase | |||
| 19080 | M | M.Eco380102ORF17885P (100% identity) | M.Eco24C19ORF19080P | |
| 19085 | TIGR03757 family integrating conjugative element | |||
| plasmid pRHB24-C19_2 | ||||
| 24235 | 73 aa hypothetical protein | |||
| 24240 | M | M.Sen4346ORF22715P (100% identity) | M.Eco24C19ORF24240P | |
| 24245 | 89 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11925 | HNH endonuclease | |||
| 11930 | R | SdyFF10McrCP (100% identity) | Eco24C19McrCP | |
| 11935 | R | SflSTLE4McrBP (100% identity) | Eco24C19McrBP | |
| 11940 | IS3-like element IS3 family transposase | |||