Escherichia coli RHB25-C02 |
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Putative Escherichia coli RHB25-C02 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 5,173,634 bp
GenBank #: CP057484
REBASE acronym: Eco25C02
Org_num: 43071
All begin HVY17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10125 | IS3 family transposase | |||
| 10130 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.Eco25C02ORF10130P |
| 10135 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.Eco25C02ORF10130P |
| 10140 | YecA family protein | |||
| 10145 | cold shock domain-containing protein | |||
| 10150 | R | Ecoppa2ORF22455P (100% identity) | GATGNNNNNNTAC | Eco25C02ORF10130P |
| 10155 | M48 family metallopeptidase | |||
| 14765 | transcription factor | |||
| 14770 | M | M.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | M.Eco25C02ORF14770P |
| 14775 | S | S.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | S.Eco25C02ORF14770P |
| 14780 | DUF4433 domain-containing protein | |||
| 14785 | macro domain-containing protein | |||
| 14790 | R | Sbo49812IP (100% identity) | YTCANNNNNNGTTY | Eco25C02ORF14770P |
| 14795 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2010 | cell division protein DamX | |||
| 2015 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco25C02DamP |
| 2020 | ribulose-phosphate 3-epimerase | |||
| 2540 | DUF2556 family protein | |||
| 2545 | M | M.Ecoppa2ORF6235P (100% identity) | ATGCAT | M.Eco25C02ORF2545P |
| 2550 | DNA-binding transcriptional regulator Fis | |||
| 4320 | osmoprotectant transport activator ProQ | |||
| 4325 | M | M.SflFF24DndBP (100% identity) | M.Eco25C02DndBP | |
| 4330 | DNA phosphorothioation system sulfurtransferase | |||
| 4325 | DNA sulfur modification protein DndB | |||
| 4330 | M | M.SflFF24DndCP (100% identity) | M.Eco25C02DndCP | |
| 4335 | DNA sulfur modification protein DndD | |||
| 4330 | DNA phosphorothioation system sulfurtransferase | |||
| 4335 | M | M.SflFF24DndDP (100% identity) | M.Eco25C02DndDP | |
| 4340 | DNA sulfur modification protein DndE | |||
| 4335 | DNA sulfur modification protein DndD | |||
| 4340 | M | M.SflFF24DndEP (100% identity) | M.Eco25C02DndEP | |
| 4345 | DGQHR domain-containing protein | |||
| 4355 | accessory gene regulator B family protein | |||
| 4360 | R | EcosEC5DptHP (100% identity) | Eco25C02DptHP | |
| 4365 | DNA phosphorothioation-dependent restriction | |||
| 4360 | DNA phosphorothioation-dependent restriction | |||
| 4365 | R | SflFF24DptGP (100% identity) | Eco25C02DptGP | |
| 4370 | DNA phosphorothioation-dependent restriction | |||
| 4365 | DNA phosphorothioation-dependent restriction | |||
| 4370 | R | SflFF24DptFP (100% identity) | Eco25C02DptFP | |
| 4375 | porin family protein | |||
| 9870 | phosphohydrolase | |||
| 9875 | M | M.Ecoppa2DcmP (100% identity) | CCWGG | M.Eco25C02DcmP |
| 9880 | V | V.Ecoppa2DcmP (100% identity) | V.Eco25C02DcmP | |
| 9885 | drug/metabolite exporter YedA | |||