Escherichia coli RHB28-C05 |
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Putative Escherichia coli RHB28-C05 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,481,925 bp | CP057384 |
| plasmid pRHB28-C05_3: | 44,007 bp | CP057386 |
REBASE acronym: Eco28C05
Org_num: 43095
All begin HVY50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5200 | GTPase family protein | |||
| 5205 | M | M.EcoNT1F25ORFBP (93% identity) | M.Eco28C05ORF5205P | |
| 5210 | S | S.Eco41C07ORF5215P (100% identity) | S.Eco28C05ORF5205P | |
| 5215 | R | Eco819ORF3430P (100% identity) | Eco28C05ORF5205P | |
| 5220 | transposase domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1655 | cell division protein DamX | |||
| 1660 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco28C05DamP |
| 1665 | ribulose-phosphate 3-epimerase | |||
| 2280 | DUF2556 family protein | |||
| 2285 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco28C05ORF2285P |
| 2290 | DNA-binding transcriptional regulator Fis | |||
| 8695 | phosphohydrolase | |||
| 8700 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco28C05DcmP |
| 8705 | V | V.SflSTLE1DcmP (100% identity) | V.Eco28C05DcmP | |
| 8710 | drug/metabolite exporter YedA | |||
| 18600 | HNH endonuclease | |||
| 18605 | R | SflSTLE4ORF19250P (48% identity) | Eco28C05ORF18605P | |
| 18610 | IS1 family transposase | |||
| plasmid pRHB28-C05_3 | ||||
| 21890 | IS1380-like element ISEc9 family transposase | |||
| 21895 | R | EcoPK6ORF23325BP (100% identity) | CCWGG | R2.Eco28C05ORF21900P |
| 21900 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.Eco28C05ORF21900P |
| 21905 | IS1 family transposase | |||