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Putative Prevotella scopos 361B RM systems
Ref: Carlson et al. unpublished
REBASE ref # 31012
Sequence length: | GenBank #: | |
Chromosome: | 764,699 bp | NEBC15735 |
Chromosome: | 2,885,772 bp | NEBC15736 |
REBASE acronym: Psc361B
Org_num: 43043
All begin ORF_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
From PmPmel361B.fasta | ||||
scf7180000000011.scf7180000000008.scf7180000000010-quiver | ||||
1579 | 102 aa hypothetical protein | |||
1580 | S | S4.Pme0300IIIP (90% identity) | S3.Psc361BIP | |
1581 | Integrase/recombinase | |||
1582 | 109 aa hypothetical protein | |||
1583 | S | S3.Pin1779ORF4645P (66% identity) | S2.Psc361BIP | |
1585 | S | S1.Pme760ORF3585P (66% identity) | CCAYNNNNNNNTTC | S1.Psc361BI |
1586 | M | M.Pme760ORF3585P (97% identity) | CCAYNNNNNNNTTC | M.Psc361BI |
1588 | R | Pme760ORF3585P (97% identity) | CCAYNNNNNNNTTC | Psc361BIP |
1592 | 70 aa hypothetical protein | |||
scf7180000000011.scf7180000000008.scf7180000000010-quiver | ||||
1904 | MBL fold metallo-hydrolase | |||
??? | M | M.Pme0091ORF2685P (98% identity) | M.Psc361BORFAP | |
1910 | 88 aa hypothetical protein CVT99_04705 | |||
1912 | S | S.Ean353ORF968P (34% identity) | S1.Psc361BORFAP | |
1914 | S | S2.Pni630ORF9505P (79% identity) | S2.Psc361BORFAP | |
1915 | 74 aa hypothetical protein | |||
1916 | four helix bundle protein | |||
1917 | 67 aa hypothetical protein | |||
1918 | 68 aa hypothetical protein | |||
1919 | R | Pme0054ORF13010P (97% identity) | Psc361BORFAP | |
1922 | efflux transporter, outer membrane factor lipoprotein, NodT family | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
From PmPmel361B.fasta | ||||
scf7180000000011.scf7180000000008.scf7180000000010-quiver | ||||
1735 | folylpolyglutamate synthase | |||
1737 | M | M.Pme0091ORF2905P (99% identity) | TTCGAA | M.Psc361BII |
1738 | R | Pme0091ORF2905P (100% identity) | TTCGAA | Psc361BIIP |
1741 | C | C.Pme0091ORF2905P (100% identity) | C.Psc361BIIP | |
1742 | 60 aa hypothetical protein | |||
scf7180000000011.scf7180000000008.scf7180000000010-quiver | ||||
2383 | 81 aa hypothetical protein | |||
2384 | M | M.Pme0054I (99% identity) | CTRYAG | M.Psc361BIII |
2385 | R | Pme0054IP (99% identity) | CTRYAG | Psc361BIIIP |
2386 | 63 aa hypothetical protein | |||
scf7180000000011.scf7180000000008.scf7180000000010-quiver | ||||
4983 | 80 aa hypothetical protein HMPREF3202_01911 | |||
4984 | M | M.Psc361BORFGP (100% identity) | M.Psc361BORFFP | |
4985 | thymidylate synthase | |||
scf7180000000011.scf7180000000008.scf7180000000010-quiver | ||||
5144 | 66 aa hypothetical protein | |||
5145 | M | M.Psc361BORFFP (100% identity) | M.Psc361BORFGP | |
5146 | thymidylate synthase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
From PmPmel361B.fasta | ||||
scf7180000000009-quiver | ||||
186 | 84 aa hypothetical protein | |||
187 | M | M.PhiF0411I (92% identity) | CGGTA | M.Psc361BIV |
191 | R | PhiF0411IP (91% identity) | CGGTA | Psc361BIVP |
192 | TIGR02391 family protein |