Escherichia coli RHB29-C15 |
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Putative Escherichia coli RHB29-C15 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 4,892,459 bp
GenBank #: CP057344
REBASE acronym: Eco29C15
Org_num: 43105
All begin HVY64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5610 | IS1 family transposase | |||
| 5615 | R | EcoB1109aORFAP (100% identity) | AAGANNNNNCTC | Eco29C15ORF5625P |
| 5620 | S | S.Ecou015ORF5205P (100% identity) | AAGANNNNNCTC | S.Eco29C15ORF5625P |
| 5625 | M | M.EcoB1109aORFAP (100% identity) | AAGANNNNNCTC | M.Eco29C15ORF5625P |
| 5630 | transposase | |||
| 19915 | restriction endonuclease | |||
| 19920 | M | M.EcoR31ORF16485P (100% identity) | CGTANNNNNGTC | M.Eco29C15ORF19920P |
| 19925 | S | S.EcoSH3ORF25175P (100% identity) | CGTANNNNNGTC | S.Eco29C15ORF19920P |
| 19930 | R | EcoR31ORF16485P (100% identity) | CGTANNNNNGTC | Eco29C15ORF19920P |
| 19935 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1795 | cell division protein DamX | |||
| 1800 | M | M.EcoSCU316DamP (100% identity) | GATC | M.Eco29C15DamP |
| 1805 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.SdyFF51ORF20390P (100% identity) | ATGCAT | M.Eco29C15ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 5735 | PerC family transcriptional regulator | |||
| 5740 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco29C15ORF5740P |
| 5745 | LexA family transcriptional regulator | |||
| 5780 | 67 aa hypothetical protein | |||
| 5785 | M | M.EcoWATORF2902P (100% identity) | M.Eco29C15ORF5785P | |
| 5790 | phage lysis protein EssD | |||
| 5910 | tail fiber assembly protein | |||
| 5915 | M | M.SflSTLE1ORF5615P (100% identity) | M.Eco29C15ORF5915P | |
| 5920 | R | Sso8033ORF3755P (100% identity) | Eco29C15ORF5915P | |
| 5925 | 121 aa hypothetical protein | |||
| 9230 | phosphohydrolase | |||
| 9235 | M | M.EcosNDM5DcmP (100% identity) | CCWGG | M.Eco29C15DcmP |
| 9240 | V | V.SsoSE61DcmP (99% identity) | V.Eco29C15DcmP | |
| 9245 | drug/metabolite exporter YedA | |||
| 18295 | DUF1317 family protein | |||
| 18300 | M | M.Eco41C14ORF18905P (100% identity) | M.Eco29C15ORF18300P | |
| 18305 | 93 aa hypothetical protein | |||