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Putative Escherichia coli RHB29-C23 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Sequence length: | GenBank #: | |
Chromosome: | 5,124,691 bp | CP057334 |
plasmid pRHB29-C23_2: | 119,787 bp | CP057335 |
REBASE acronym: Eco29C23
Org_num: 43109
All begin HVY68_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
10 | replication endonuclease | |||
15 | R | EcoR7ORF1275P (100% identity) | TGGCCA | Eco29C23ORF20P |
20 | M | M.Ecoww7ORF20P (100% identity) | TGGCCA | M.Eco29C23ORF20P |
25 | phage portal protein | |||
925 | phosphohydrolase | |||
930 | M | M.EcoVEV11MDcmP (100% identity) | CCWGG | M.Eco29C23DcmP |
935 | V | V.SflSTLE3DcmP (100% identity) | V.Eco29C23DcmP | |
940 | drug/metabolite exporter YedA | |||
2970 | DUF977 family protein | |||
??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco29C23ORF2975P | |
2980 | 60 aa hypothetical protein | |||
5130 | 343 aa hypothetical protein | |||
5135 | M | M.Eco392ORF5450P (100% identity) | M.Eco29C23ORF5135P | |
5140 | phage replication protein | |||
11270 | transposase | |||
11275 | R | EcoA41ORF21415P (97% identity) | GGCGGA | Eco29C23ORF11280P |
??? | M | M1.EcoA41ORF21415P (99% identity) | GGCGGA | M1.Eco29C23ORF11280P |
11285 | M | M2.EcoA41ORF21415P (100% identity) | GGCGGA | M2.Eco29C23ORF11280P |
11290 | conjugal transfer protein TraG N-terminal | |||
13475 | DNA-binding transcriptional regulator Fis | |||
13480 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco29C23ORF13480P |
13485 | DUF2556 family protein | |||
14030 | ribulose-phosphate 3-epimerase | |||
14035 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco29C23DamP |
14040 | cell division protein DamX | |||
16910 | replication endonuclease | |||
16915 | M | M.SenS1905ORF15P (100% identity) | M.Eco29C23ORF16915P | |
16920 | R | Eco4136ORFDP (100% identity) | Eco29C23ORF16915P | |
16925 | DUF262 domain-containing protein | |||
19545 | DEAD/DEAH box helicase family protein | |||
19550 | M | M.EcofEC1ORF1985P (100% identity) | M.Eco29C23ORF19550P | |
19555 | DUF3780 domain-containing protein | |||
plasmid pRHB29-C23_2 | ||||
24895 | 103 aa hypothetical protein | |||
24900 | M | M.EcoV04ORF25795P (100% identity) | SAY | M.Eco29C23ORF24900P |
24905 | single-stranded DNA-binding protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5010 | isocitrate dehydrogenase | |||
5015 | R | EcosEC27McrCP (100% identity) | Eco29C23McrCP | |
5020 | R | EcoteDMcrBP (100% identity) | Eco29C23McrBP | |
5025 | recombinase family protein |