Escherichia coli RHB33-C17 |
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Putative Escherichia coli RHB33-C17 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,030,467 bp | CP057190 |
| plasmid pRHB33-C17_2: | 102,988 bp | CP057191 |
REBASE acronym: Eco33C17
Org_num: 43131
All begin HVZ16_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2070 | integrase arm-type DNA-binding domain-containing | |||
| 2075 | M | M.SflWW1ORF19920P (100% identity) | M.Eco33C17ORF2075P | |
| 2080 | restriction endonuclease | |||
| 2095 | IS3 family transposase | |||
| 2100 | R | SflFF16ORF19630P (100% identity) | Eco33C17ORF2100P | |
| 2105 | sialate O-acetylesterase | |||
| 7160 | TraR/DksA family transcriptional regulator | |||
| 7165 | M | M.Sen8466ORF10450P (100% identity) | GATC | M.Eco33C17ORF7165P |
| 7170 | replication endonuclease | |||
| 8285 | TrmB family transcriptional regulator | |||
| 8290 | M | M.EcoW26ORF35400P (100% identity) | M.Eco33C17ORF8290P | |
| 8295 | 92 aa hypothetical protein | |||
| 9330 | PerC family transcriptional regulator | |||
| 9335 | M | M.EcoH227ORFAP (100% identity) | GATC | M.Eco33C17ORF9335P |
| 9340 | LexA family transcriptional regulator | |||
| 13700 | drug/metabolite exporter YedA | |||
| 13705 | V | V.SsoSE61DcmP (100% identity) | V.Eco33C17DcmP | |
| 13710 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco33C17DcmP |
| 13715 | phosphohydrolase | |||
| 17440 | ribosome-associated translation inhibitor RaiA | |||
| 17445 | M | M.EcoBU10ORF24005P (100% identity) | M.Eco33C17ORF17445P | |
| 17455 | Hok/Gef family protein | |||
| 21140 | DNA-binding transcriptional regulator Fis | |||
| 21145 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco33C17ORF21145P |
| 21150 | DUF2556 family protein | |||
| 21695 | ribulose-phosphate 3-epimerase | |||
| 21700 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco33C17DamP |
| 21705 | cell division protein DamX | |||
| plasmid pRHB33-C17_2 | ||||
| 25005 | 73 aa hypothetical protein | |||
| 25010 | M | M.EcoWY5172ORF23370P (100% identity) | M.Eco33C17ORF25010P | |
| 25015 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9535 | recombinase family protein | |||
| 9540 | R | EcoH227GmrSDP (100% identity) | Eco33C17GmrSDP | |
| 9545 | isocitrate dehydrogenase | |||