Escherichia coli RHB33-C19 |
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Putative Escherichia coli RHB33-C19 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 5,079,129 bp
GenBank #: CP057188
REBASE acronym: Eco33C19
Org_num: 43132
All begin HVZ17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13270 | restriction endonuclease subunit M | |||
| 13275 | M | M.EcoS40ORF24345P (100% identity) | RTCANNNNNNCTC | M.Eco33C19ORF13275P |
| 13280 | S | S.EcoSCU103ORF3030P (100% identity) | RTCANNNNNNCTC | S.Eco33C19ORF13275P |
| 13285 | R | EcoP231ORF1540P (100% identity) | RTCANNNNNNCTC | Eco33C19ORF13275P |
| 13290 | integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 795 | TrmB family transcriptional regulator | |||
| 800 | M | M.EcoEC0009ORF5530P (100% identity) | A | M.Eco33C19ORF800P |
| 815 | tellurite resistance TerB family protein | |||
| 1075 | phosphohydrolase | |||
| 1080 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco33C19DcmP |
| 1085 | V | V.SsoSE61DcmP (100% identity) | V.Eco33C19DcmP | |
| 1090 | drug/metabolite exporter YedA | |||
| 1910 | 67 aa hypothetical protein | |||
| 1915 | M | M.EcoMEC0002ORF6515P (99% identity) | M.Eco33C19ORF1915P | |
| 1930 | tellurite resistance TerB family protein | |||
| 6025 | holin | |||
| 6035 | M | M.Eco40C03ORF2345P (98% identity) | M.Eco33C19ORF6035P | |
| 6040 | TrmB family transcriptional regulator | |||
| 7735 | replication endonuclease | |||
| 7740 | M | M.KpnRKPORF17480P (100% identity) | GATC | M.Eco33C19ORF7740P |
| 7745 | TraR/DksA family transcriptional regulator | |||
| 8410 | NinE family protein | |||
| 8415 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.Eco33C19ORF8415P |
| 8420 | recombination protein NinB | |||
| 12810 | LexA family transcriptional regulator | |||
| 12815 | M | M.EcoMB19ORF20960P (99% identity) | GATC | M.Eco33C19ORF12815P |
| 12820 | PerC family transcriptional regulator | |||
| 13245 | HNH endonuclease | |||
| 13250 | R | EcoWCTORF19980P (100% identity) | Eco33C19ORF13250P | |
| 13255 | McrC family protein | |||
| 18025 | cell division protein DamX | |||
| 18030 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco33C19DamP |
| 18035 | ribulose-phosphate 3-epimerase | |||
| 18580 | DUF2556 family protein | |||
| 18585 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco33C19ORF18585P |
| 18590 | DNA-binding transcriptional regulator Fis | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13250 | HNH endonuclease | |||
| 13255 | R | EcoZ151McrCP (100% identity) | Eco33C19McrCP | |
| 13260 | R | SflSTLE4McrBP (100% identity) | Eco33C19McrBP | |
| 13265 | IS3-like element IS3 family transposase | |||